Oncorhynchus mykiss (rainbow trout): 110525335
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Entry
110525335 CDS
T07259
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110525335
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
110525335
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
110525335
NCBI-ProteinID:
XP_036835368
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Position
6:17360752..17412856
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AA seq
1209 aa
AA seq
DB search
MSGKIESKPDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKVSKPPLEHGVKTAEKPANKSL
SRLEEQEKDVVSALRYFKTIIDKMAVDKKVLEMLPGSASKVLEAILPLVQVDARIQHSSG
VSSCLNRVYQSLGNLIRWSDQVMLEGVNLEDKETIVTVTTVIKAVLDGVKELVKLTIEKQ
EHPSPTSPVKPVPVAIPPESAAEPPANEKESLDKSSATSQSMEALTEPTGEEEEEVVAPP
KPPLPGLKMAEHNPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPMGIGLHKQEYEVD
ALQRRFSGGSHYYGGESPRISPCNSMGKLSKSDGQLSWTMDSGQCSRNTSSEALDTTDHY
DPDYDFLHQDLSSLEQMTPVPVGACLSPLPESHSESSCPGPGPPLAQLHFSSLQGCSVSP
LYSRMTSALPPPALPEKKRRGGACSGFSDGSYSGSSWCISFERHPSQYDNLMEEDLPPVP
PFPLFTPDILPLCHTAGGFVSEFSGSETTDVPQSPPPLPEKKSRHILKYMQFVEDYSEPQ
PSVFYQMPQSKSIYEQRNKHFQEVYGFNDSFSSSDSVHEPLPPPALPPKQRQLASHSASS
SSSSSSSLSCHLQQSQAAVVVEEETGAALSMSVSNSSLTTPMHKTVLRSYSQDFAPLCQS
SIPYLLSSVSSHSPIVHQSQSMDLAAPGSGSPDPVLVANGSLDSSLAIGLLTDSSFSDTR
QTSLSESANEEGGEGEYVNLYTSSHANGDGLSRRDSSAIDDSLEDTASENPLCNNKDMSD
DRRRQKSSEDGQSSEETDELSLIDHMEIMSRLTLKQENDDGPDVRAGSGDILLVHATETD
RKDLVLYCEAFLTTYRTFITPEDLIKKLHYRYTRFCHCPDTFKKKVSKNTFFVLVRVVDE
LCLVEMTEDILMQLMDLVFRLVCNGELSLARVLRTNILDKVEQRKLLRYTYSLKPLAARG
VAARPGTLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSANLTQFTEHFNN
MSYWVRSIIILQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQK
TTSEGLEEYCTLIDSSSSFRVYRAALADVEPPCIPYLGLILQDLTFVHLGNPDQINGKVN
FSKRWQQFNILDSMRRFQQVHYDLKHNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITR
RKTEREEKT
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagtaaaccagactcccaacgctcccatttgtcttccttcacc
atgaagcttatggacaagttccactctcccaaaatcaaaaggacaccctcaaagaaagtc
agtaagccgcctttagaacatggcgtcaagactgcggagaaacctgctaacaagagtctg
agtcggttagaggagcaagagaaagacgtggtcagtgccttgcgttacttcaagaccatc
attgacaagatggcggtggacaagaaggtgctggagatgttaccaggctctgccagtaag
gtcctggaggccatcctgcctttagtccaagtggacgcaaggatccagcacagctcgggg
gtgtcctcctgtctgaaccgtgtgtaccagagtctgggcaatctcatccgttggtctgac
caagtcatgctggagggggtcaacctggaagataaagaaaccatcgttaccgtcaccact
gtgatcaaggcagtgcttgatggtgttaaggagctagtgaaactgaccatagagaaacag
gagcatccttcccccacgtctcctgtcaaaccagtgccagtggccatcccacccgagagt
gctgctgagccgcctgccaatgagaaggagagtctggacaagagctcagccacgtcccaa
tctatggaagccctgactgaacccacgggagaggaggaggaggaggtggtggccccacca
aaaccccctctccctggcctcaagatggctgaacacaatcctcctgctctgcctccaaag
aagcgccagtctgccccctcccccacccgggtggcagtagtggcccccatgagccgcgcc
accagtggctccagtcttcccatgggcatcggcctccacaaacaggagtacgaggtggat
gccctgcagcggcgcttctctgggggcagccattactacggaggggagtcgccgcgcata
tccccctgcaatagcatgggcaagctgagcaagtctgacgggcagctgtcctggacaatg
gacagtgggcagtgctcacgcaacaccagcagtgaggctctggacaccacagaccactac
gacccagactacgacttcctgcaccaggacctgtccagcttggagcagatgactcctgtg
ccagtgggagcgtgcctcagccccctgcctgagtcccacagcgagtcttcctgccctggc
cccggtccgccgctggcacaactccacttcagctccctccagggctgctctgtgtccccc
ctctactcccgaatgacttccgccctgccgccccctgccctgccggaaaagaagcgccga
ggtggcgcctgctcaggcttttccgacggctcctactcgggctcatcctggtgcatttcc
tttgagcgccacccatcccagtacgacaacctcatggaggaggacctaccgcctgtgccc
ccctttcccctgttcacgcccgacatcttgcccctgtgccacaccgccggggggtttgtg
tctgagttcagcggcagcgagacgacagacgtacctcagagtccaccgccactccctgag
aagaagagccgtcacatactgaagtacatgcagtttgtggaagactactcggagccccag
ccctcagttttctaccagatgccacagagcaagagcatctatgagcaacgcaacaagcac
ttccaggaagtctacggcttcaatgactcgtttagcagcagcgactctgtccacgagccc
ctcccacccccggcactgccacccaaacagaggcagctggcctcccactctgcctcttcc
tcgtcctcttcctcgtcctctctctcctgccaccttcagcagtcgcaggctgcagtggtg
gtggaggaggagacgggggctgctctcagcatgtcagtctctaactcctccctgaccacc
cctatgcataagacagttctccggtcctattctcaggactttgcacctctctgccaatct
tccattccatatcttctctcatctgtctcttcccactctcccattgtccaccaatcacag
agcatggacctagcggccccgggcagtggcagccctgaccctgtgctggtggccaacggc
tctctggacagctctcttgctatcggtcttctcactgactcttctttctctgacactcgt
caaacctctttgagcgaaagcgctaacgaggaaggcggggagggagagtacgttaatctg
tacacatcgagccatgccaacggagatgggctctcccgccgagactcgtctgccatagat
gactcactggaggacactgcctcagagaacccactgtgcaataacaaggacatgtccgat
gaccgccgaagacaaaagtcgtctgaagatgggcagagtagcgaggagacggatgagctt
tccctcatcgatcacatggagatcatgtcccggttaacactaaagcaggagaacgatgac
ggtccagatgtccgagccggatcgggggatattttattagtccacgccacagaaacggac
cgcaaagatcttgtcttgtactgtgaggctttcctgacgacgtacagaacgttcataacc
ccagaggaccttatcaaaaagctgcactacagatacaccaggttttgtcactgcccagat
accttcaagaagaaagtcagcaaaaacaccttctttgttcttgtccgtgtggtggacgag
ctgtgtctggtggagatgacggaggacatcctgatgcagctgatggacttggtgttcagg
ctggtgtgtaacggtgagctgagcctggcccgcgtcctccgcacaaacatcctggacaag
gtggagcagaggaagctgctgcgctacacctactcgctcaaaccactggccgcaagaggt
gtcgccgccagacctgggaccctgcacgacttccgaagtcatgagatcgccgaccagcta
actctcctggatgcagagctcttctacaaaattgagatccctgaggtgttgctttgggct
aaggagcagaacgaggagaagagtgccaacctcacacagttcacagagcactttaacaac
atgtcctactgggtacgctccataatcattctgcaagagaaagcccaggaccgagaaaag
ctcctcctcaaatttatcaaaataatgaagcacttacggaagctaaataatttcaactca
tatttggcaatattatctgccttggattcagctcccatccgaagactggagtggcagaaa
acaacctcagagggcctagaggaatactgcacgttaatagacagttcctcgtcgttccgg
gtataccgagcggcactggcagacgtggagcccccatgtataccatatctgggtcttatc
ctccaggacttgacctttgtccatctgggcaaccctgatcaaatcaacgggaaggtcaac
ttctccaagcgctggcagcagttcaacatcctggacagcatgaggcgcttccagcaggtg
cattatgatctgaaacacaacgacgatattgtctccttcttcaacgacttcagcgaccac
ctggcagaggaggctctgtgggagctgtctttgaagatcaaacctcggaacattacacgg
cgcaaaacagagcgcgaagaaaagacatag
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