Oncorhynchus mykiss (rainbow trout): 110525340
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Entry
110525340 CDS
T07259
Symbol
card9
Name
(RefSeq) caspase recruitment domain-containing protein 9 isoform X1
KO
K12794
caspase recruitment domain-containing protein 9
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04621
NOD-like receptor signaling pathway
omy04625
C-type lectin receptor signaling pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110525340 (card9)
04625 C-type lectin receptor signaling pathway
110525340 (card9)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110525340 (card9)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD
GCIP_C
USHBP1_PDZ-bd
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
110525340
NCBI-ProteinID:
XP_021461047
Ensembl:
ENSOMYG00000002420
UniProt:
A0A8C7LUX4
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Position
6:complement(17446171..17451908)
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AA seq
548 aa
AA seq
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MTDSQSVSDMEDEQCWVQLEDYRMLLIKTIEPSRITPYLRHCKVLSSEDEEQIFNDPSLV
IRQRKVGVLLDILQRTGLKGYVTFLESLELDYPRLYRKITGKEPARVFSVLVDTVGESGL
TQFLMSEVTRLQKGLQEERRRRQEATWAAATQEDALRQQQVKERELRKQQERVQCMREER
DQQWEVVCHLKDENYSLMHNITKLSEEKNSALMSNRDLQLEIEKLKHSLMKAESDSKIQR
KQTVNLKNAIEKRPSQDMIWQLQRDNDLLTVRIQELESPAQQGTAPAPLDQEKLSTESLE
DYKQHSQAQHQELVNNIYNLRRDLHDAEALRNRYLEAKEVLELKCTTLKKDAKMYRDRME
DILKQMDEVIRERDKAIASREEYHQENSRSLQEKDQYRKQIRELGERCDELQVQLFRTEA
EVMALQTRLHINTCSPHDKSQTSEEDCRDTLTEASNGDLQCQTSGEYDVCIALQVHPLCA
EGSPEDNISGERALSEDEPSDCSKLRERRDFYYRRKRALRRSKATCKECKPCVLDNSSGS
DNTDTDGM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgactgacagtcagagtgtgtcagatatggaggatgagcagtgctgggtccagctggag
gattacagaatgctgctgataaagaccattgagccgtcgcgaatcactccttacttgcgt
cattgtaaggtgctaagcagtgaggatgaggagcagatattcaatgaccccagtctggtc
atccgccagcgcaaagtaggtgtactattggatattcttcaaagaactggactcaaaggc
tatgtgacattcctcgagagcttggagctggactatcctcgattgtatcgcaaaattact
ggcaaagaacctgcccgggtcttttctgtactagttgacacggtgggtgagtcaggactg
actcagttcttgatgagtgaagtcacacgtctgcagaagggcctgcaggaagaacgccgg
cgtagacaagaggccacttgggctgcagccacgcaggaggacgccttacggcagcagcag
gttaaggagagggagctgcggaagcagcaggagcgagtgcagtgtatgagggaggagagg
gaccagcaatgggaggtggtatgccacctgaaggacgagaactacagcctgatgcataac
ataaccaagctgagcgaagagaagaatagtgctctcatgtccaaccgggatctgcagtta
gagatagaaaagctgaagcacagcctgatgaaggcagagagtgactcgaaaatccaacgc
aagcaaactgtgaacctgaagaatgccattgagaagagacccagtcaggacatgatttgg
cagctccagagagacaacgatctgctcacagtgcgcatccaggagctggagagcccagct
cagcaggggacagctccagcccccttggatcaagagaagctgagcactgagagtctggag
gactacaagcagcactctcaggctcagcaccaggagctggtcaacaacatctacaaccta
cgcagagatctgcacgatgctgaggcactacggaatcggtacttggaggcgaaggaggtt
cttgagttgaagtgcacaacattaaagaaagatgcaaaaatgtatcgtgaccgaatggag
gacatcctgaaacagatggatgaggttatcagggagagagacaaggccatcgcctctcga
gaggagtaccaccaggagaattcacggagcctccaggagaaggaccagtaccggaagcag
attcgggagctgggtgagcgctgtgatgagctgcaggtccagttgttccggactgaggca
gaggttatggctctacagaccaggcttcacattaacacctgctccccacatgataaaagc
cagaccagtgaggaagactgcagagatacattaaccgaagctagtaatggggacctgcaa
tgtcagacatcgggggagtatgatgtgtgcattgctttgcaagtccacccgttgtgtgca
gaagggtccccggaggataatatctcaggagaaagggctttatcagaggatgagccctca
gactgcagcaagctcagagagaggcgtgacttctactacagaaggaaacgtgcccttagg
aggtcaaaggccacatgcaaggaatgcaaaccctgtgtcctggacaacagcagtggaagt
gacaacactgacacggatgggatgtga
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