Oncorhynchus mykiss (rainbow trout): 110525357
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Entry
110525357 CDS
T07259
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110525357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110525357
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110525357
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
HECT type E3
110525357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
110525357
NCBI-ProteinID:
XP_021461069
Ensembl:
ENSOMYG00000005095
LinkDB
All DBs
Position
6:17774686..17789072
Genome browser
AA seq
1065 aa
AA seq
DB search
MFSATQSSKSEFLDKARQAREERKGYKERERAATLIQALVRRFLCRCKLQKQIRKEVDDF
FQDVGTTKRNALSIFKIARKLLFIFCQEDKLRFEKLCRSILGSMEVENEPKVWYVSLALS
KDLTIPWIKQIKDVLWVSCNFLKKLKPDILQDNKLVTLYLTMLVTFTDTSTWKIVRGKGE
ALRPALTRICENIMGHLNQKGFYSILQILLTNGLARSRPSLTKGTLTAVFTLALRPVIAA
HFSDNLLRSLLIHIMSVPAVVSHINTITPECMATIQTHDLLRKFTLFLSREEQCVDICVC
LEGSHTLCLLGNLIHLGYLNEKVLEEEANHFVKDLTDMLSYCQRYVSQKKSNLTHWHPVL
GWFSQTVDYGLNESMPLVTKQLQYLWGMPVIRTLFSDVLSKKLETQEPTPPPQPTTSQNN
LPVKSLFKRAFQKSASVRNILKPVGGRRVDSAEVQKVCSICVLYQTALTTLTQIRLQILT
GLTYLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKQLLAMLMLFCDCSRHLITIL
DDIEVYEEQISFKTEELVTISSFLNTFVYKMVWDGILENAKGEKLDLFHSVHGWLMVLYE
RDCRRRFSPDDNWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNRVLLFRNIITK
EKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGVDEA
GIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGKMLG
KAMYEGIVVDVPFASFFLSQVMGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDVGDL
GLTLSYDEDVMGQLVCHELIPGGKTMQVTNENKISYIHLMAHFRMHTQIKEQTAAFIRGY
RSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDILSSD
FSSEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRK
KEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgcaactcagagttccaagtctgagttcctggacaaagccaggcaggcacgt
gaggagaggaaggggtacaaagagagggagagagcagccactctgattcaagcgctggtc
aggagattcctctgtcgctgcaaactccagaagcaaataaggaaagaggttgatgacttc
tttcaagatgtcggaacaacaaaaagaaatgcactatcaatttttaaaattgctcggaag
ttgttattcattttttgtcaagaggataagctgaggtttgagaagctttgtcgctccatt
cttggtagcatggaggttgaaaatgagcccaaagtttggtatgtgtcactggccctttcc
aaagacctcaccatcccatggataaagcagatcaaagatgttctgtgggtctcctgtaat
tttttgaaaaaattaaagcctgacatcctgcaggacaataagctggtgactttgtacctt
accatgctggtgaccttcacagacacgtcaacctggaagatagtgagagggaaaggagag
gccctcagaccagcattgacccggatctgtgagaacatcatggggcatctcaatcaaaag
ggattttattcaatactgcagattctactcaccaacggattggcgcgctccagaccctct
cttaccaagggcacactcacagcagtattcacgttggcattaagacctgtcattgctgct
cacttctctgacaacctgctgaggtctcttctcatccacatcatgtctgtcccagctgtc
gtctcccacatcaacaccatcaccccagagtgcatggccaccatacagacccacgacctg
ctgaggaagttcaccctgttcctgagccgtgaggagcagtgtgttgacatctgtgtctgc
ctggaggggagccacacactgtgcttgctgggtaacctgattcacctgggctacctcaac
gagaaagtcctggaggaggaggccaaccactttgtgaaagacctgacggacatgctgtcc
tactgccagagatacgtgtcccagaagaaatccaacctcacccactggcacccggtccta
ggctggttttcccaaactgtagactacggtctgaatgagtctatgccactggtcaccaag
cagctgcagtacctgtggggcatgcctgtgatccggactctcttcagtgacgtgctcagc
aaaaagcttgagacccaagagcccacgcctccaccacagcctaccacgtcgcagaacaac
ctgccagtcaagagcctctttaagcgggcgtttcagaagtctgcctcggtgcgcaacatc
ttgaagccggtcggcgggagacgagtggactccgctgaggtgcagaaggtgtgcagtatc
tgtgtgctgtaccagacagccctcaccacgctcactcagatacgactgcaaatcctcact
ggcctaacctacctggatgaccttctgcctaagctgtgggccttcatatgcgagctaggc
ccccagggaggcctcaagctgttcatggagtgcctgaacaacgacacagaggagtctaag
cagctgctggccatgctcatgctgttctgtgactgctccagacacctcatcacgatcctg
gatgatatcgaggtttacgaggagcagatctcatttaagacagaagagcttgtcaccatc
tcctcgtttctcaacacatttgtgtacaagatggtctgggacggcattttagagaatgcc
aagggggagaagctggacctgttccacagtgttcacggctggctgatggtgctctatgag
cgggactgcaggaggaggttctcccctgatgataactggctgcgcaaggatctgaagccg
agccttttgttccaagagctggagaagggcaagaggagagctcagctgttactgcagtac
ataccacatgtcattccccacaaaaacagggtcctgctgttccggaacattattaccaag
gagaaggaaaccttgggattggtggaaacaagctccgcgtctccgcatgtcacccatatc
accattcgccgctcacggatgttagaggatggttatgaccaactccgccggttgcctgtc
aactccatcaaaggcgtgatccgtgtgaagtttgtcaacgacctgggtgtggacgaggcc
ggaatcgaccaggacggcgtcttcaaggagttcctggaagagatcatcaagaaagtcttc
aacccagcactcaacctctttaagaccaccagtggcaacgagaggttgtacccctcccct
acatcctacatccacgagaaccacctgcagctttttgagtttgtggggaagatgcttggc
aaagcaatgtatgagggcatcgtggtggacgtacccttcgcctccttcttcctcagccag
gtcatgggtcaccaccacagcaccttctacagctccatcgacgagctgccctccctggac
tctgagttctacaagaacctcacctccatcaagcgctatgacggggatgttggtgatttg
ggtctgacactatcgtatgacgaggatgttatgggacagctggtctgtcacgagctgatt
cctggaggaaagacgatgcaagtcaccaacgaaaacaagatcagctacatccacctgatg
gcgcacttccgcatgcacacgcagatcaaggagcagacggcagcttttatccgaggatac
cgcagcatcatcaaccccgagtggctgcacatgttctccacccccgaggtccagcgcctc
gtctccggggacaacgccgagattgacctggacgacctcaagaaacacacagtttactat
ggaggtttccacagcagccatcgggtcatcatctggctgtgggacatcctgtccagtgac
ttctcctctgaggaaagagccatgttcctcaagtttgtcaccagttgttcaagacccccc
ctcctaggttttgcctacctcaagccccctttctccatccgctgtgtggaggtgtctgac
gatcaggacactggggacaccctaggcagcgtcctccggggtttcttcaccatccggaag
aaggaaccaggcggtcgcctccccacctcgtccacctgcttcaacctgctcaagctgcct
aactacagcaagaagagcatcctgcgtgacaagctccgctacgccatcagtatgaacaca
ggtttcgagctctcataa
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