Oncorhynchus mykiss (rainbow trout): 110525370
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Entry
110525370 CDS
T07259
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110525370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110525370
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110525370
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110525370
NCBI-ProteinID:
XP_021461097
Ensembl:
ENSOMYG00000008320
UniProt:
A0A8C7P6H3
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Position
6:complement(18121017..18139639)
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AA seq
593 aa
AA seq
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MTRQDSAAPAGSLSVQGPSNPGYNTNPVPVPVITQTDTRDKWSKKMDFLLSVIGFAVDLG
NVWRFPYICYQNGGGAFLIPYIVMAIFGGVPLFYMELALGQFHRTGAISIWKHICPIFKG
IGYAICVISLYVSFYYNTIIAWALFYFYSSFASVLPWTNCDNAWNTENCTNYFLKDNVTW
NNYSRSPAEEFYTRNVLEIHKSDGLSNVGGVRWQLMLCLFLIFTIVYFSLWKGVKTSGKV
VWVTATLPYVVLFILLIRGATLPGAWKGVVFYLQPKWEKLFETSVWVDAAAQIFFSLGPG
FGVLLALSSYNPFTNNCYRDAIVTSLVNCLTSFMSGFVIFTMLGYMAEKRNVNVEDVARD
KGPSLLFITYPEAIANMTGSTFFAIIFFVMMITLGLDSTFGGLEAIITAVMDEYPEYLAH
RRELFVLGLVVVCFLGSLSTLTNGGAYVVKLLEEFGVGSSIIAVGFLEAIAVSWFYGITR
FSNDIKSMLGYYPGLFWKVCWVAISPAFLAYIIVSSLLKPAPLQLFDYKYPDWSITVGYI
IGASSFMWIPIYMVYKLVWTPGSLKQRLAVCLRPERTIMPEIHTDSLNMSTVP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccaagactcagcggccccagcgggaagcttgagcgtccagggcccctcaaac
cccggttacaacaccaaccctgtgccggtacctgtgatcacacagacggacacacgagac
aaatggagcaaaaagatggattttcttttatcagtcattggcttcgcggtagacttggga
aatgtgtggagatttccatacatttgttaccaaaacggaggcggggctttcctaatcccc
tacattgtcatggcgatttttggaggggtgccactcttttacatggaactggcactggga
cagttccacagaactggtgccatatccatatggaaacacatatgccccatcttcaaaggc
attgggtatgcgatctgtgtcatctcgctctacgtctcattctactacaacaccatcatc
gcctgggcactcttctacttctactcgtccttcgccagtgtcctgccctggaccaactgt
gacaatgcctggaacactgaaaactgcaccaactacttcctgaaagacaacgtgacctgg
aataactactccaggtcacctgctgaggaattttacacgaggaatgttctggaaatccac
aagtccgatgggctgagtaacgtggggggtgtccgctggcagctgatgctctgcctcttc
ctcatcttcactatcgtttacttcagtctctggaagggagtgaagacatcagggaaggta
gtgtgggtgacagccaccttgccctatgtggtgctcttcatcctgttgatccgtggtgcc
accctaccaggtgcatggaagggagtggtcttctacctccagcccaagtgggagaaactc
ttcgagaccagtgtgtgggtagatgctgcggctcagatcttcttctccctggggccaggc
tttggggtactccttgccctctccagctacaaccccttcaccaacaactgttatcgtgac
gccatagtgaccagcctggtgaactgcctgaccagcttcatgtctgggtttgtgatcttc
actatgctggggtacatggcagagaagagaaatgtgaatgtggaggatgtggccagagac
aaaggtccaagcctactcttcatcacatatccagaggccatagccaacatgacaggatca
acgttcttcgccattatcttcttcgtgatgatgatcactcttgggcttgacagcacgttc
ggaggactggaggctatcattactgctgtgatggatgaataccctgaatacctggcacac
agacgggagctgtttgtactgggcttggtcgttgtgtgctttttgggctccctcagcact
cttaccaatggtggggcctatgtggtgaaactgctggaggaatttggggtgggttcctcc
atcattgctgttggttttcttgaggccatcgctgtttcctggttctatggtatcacaaga
ttcagcaatgacattaaatccatgttgggctattatcctggattattctggaaggtgtgc
tgggtggctattagtcctgcatttctagcgtatataatagtgagctccctgctcaagcct
gcgcccctccaactctttgactacaagtacccagactggagcattacggtgggctacatc
atcggtgcctcgtccttcatgtggatccccatatatatggtctacaagctggtgtggacc
cccggatcactgaaacagcgcctagctgtgtgtctgagacctgagaggaccattatgcca
gagatccacacagactccctcaacatgagtactgttccatag
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