Oncorhynchus mykiss (rainbow trout): 110525434
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Entry
110525434 CDS
T07259
Symbol
scarb2a
Name
(RefSeq) lysosome membrane protein 2a isoform X1
KO
K12384
lysosome membrane protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110525434 (scarb2a)
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Gene cluster
GFIT
Motif
Pfam:
CD36
Orthoreo_P10
DUF7657
Ly49
DUF4245
UstYa
Motif
Other DBs
NCBI-GeneID:
110525434
NCBI-ProteinID:
XP_021461211
Ensembl:
ENSOMYG00000002540
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Position
6:20624600..20645108
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AA seq
532 aa
AA seq
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MTRRSCVIYATGIVCAHLLIVGIALVVAQVFQTMIHNRLKKELTLTEASRVFESWKNPPP
PVYMEYYFFNVTNPEVFLAGGKAVVTQIGPYTYREYRPRENVTFLENGTKVYALNPKSFV
FVPEKSRGNPEVDILRTVNIPAVAVMSELNSYSFLLRTFVSIYMKSLGVEIFMTRTVHEV
LWGFKDPLLTKIHSIRPEVDEMFGLMWKKNGTHEGEFVFLTGERDYMEYGRIDTWNGLTE
MSWWSSNQSNMINGTDGSVFHPLLSRKELLYIFAADLCRSIHLGYVEDVDVKGIPAYRFA
PPHDVLQSPEENPTNAGFCVPAGDCLGTGVLKVSVCREGAPIVVSFPHFYQADDKYINAV
DGLHPNKEEHETYLDLNPTTGVPIRACKRAQLNIILNRVQGFPKTKHLNEIIFPIMFVNE
TATIDDDSAAQMRTLLLIVTLVSNFPLLIVGMGAILLIVLVVLVCRSRQKKNEVKRIDFT
EAFHSFTTAKDETAYTQVSDKPEVEPSENNYTNQPMRNGSYIAMSPVEAQKC
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgactcggagatcctgtgtaatttacgctactggaattgtctgcgcccacctactgata
gtggggatcgccttggtggtggctcaagtctttcaaacaatgattcacaaccggctaaaa
aaggaattgactttgacagaggcaagccgagtatttgagtcatggaagaacccgccgcct
ccagtctacatggagtattacttcttcaacgtgaccaatccagaagtgttcttagcaggg
ggaaaggcagtggtcacccagattggaccttacacttacagggaatacagacctagggaa
aatgtgactttccttgaaaatggaaccaaggtttatgccctgaatcccaaaagctttgtc
ttcgtcccagagaagtccagaggtaatccagaggtcgacattctgaggacagtcaacatc
ccagctgtggcggtgatgagtgagctgaactcctactccttcctgctgcgtaccttcgtc
tccatatatatgaagtccctcggcgtggagatcttcatgacccgcaccgtccacgaggtg
ctgtggggcttcaaggaccctttgctcaccaaaatccacagcattaggccagaggtggat
gagatgtttgggctgatgtggaagaaaaatggaactcatgaaggagagtttgtgttcctg
actggcgaacgtgactacatggaatatggcagaatagacacatggaacgggttgactgaa
atgtcatggtggtcctctaaccagagcaacatgatcaacgggacggacggcagtgtgttc
caccctctgttgtctaggaaagagctgctgtacatctttgcggctgacctctgcaggtct
atccatctgggttatgttgaggacgtggacgtgaagggcatcccagcctaccgttttgcc
ccgccccacgacgtcctgcagagtcctgaggagaaccccactaacgccggcttctgtgtg
ccagctggcgactgcctcggcaccggggtgctaaaagtcagtgtttgcagagaaggtgca
cctatcgtggtgtcgttcccccacttttatcaggcagatgacaagtacattaatgctgtt
gatggactgcaccccaacaaggaggagcatgaaacttaccttgaccttaacccgaccact
ggggttcccatccgtgcttgcaagagagcccagctcaatataattttgaacagagttcaa
ggcttccccaaaaccaaacatctaaacgagataatttttcccatcatgtttgtcaatgag
acggccactattgacgatgactctgctgcccagatgagaaccctgttgctcatcgtgacc
ttggtgtccaacttccctctgctcatcgtgggcatgggagccatcctgctcattgtccta
gtcgtcctggtctgcaggtctcgccagaagaagaatgaagtaaaacgtattgattttact
gaagcttttcattcttttactacggcaaaagatgaaacggcctacactcaagtcagcgac
aaaccagaggttgaaccatcagaaaacaactataccaaccagccaatgaggaacggctcc
tacatcgccatgtctcccgtggaggctcagaagtgttga
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