Oncorhynchus mykiss (rainbow trout): 110525469
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Entry
110525469 CDS
T07259
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110525469
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
Ank_2
EGF_CA
Ank
EGF_2
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_DL_JAG
EGF_3
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
110525469
NCBI-ProteinID:
XP_036835496
Ensembl:
ENSOMYG00000013769
UniProt:
A0A8C7QEM0
LinkDB
All DBs
Position
6:21391871..21444594
Genome browser
AA seq
2522 aa
AA seq
DB search
MHPFFVKLTFLLSLIVLTRGLRCSMSTELCLKLGRCEATADGNGECKCRDGFVGSKCQHR
DPCISSPCKNGGSCHTVPRGNSVDSTCSCQPGFTDRLCLTPIDNACLSSPCRNGGTCDLV
NLREYKCRCPPGWSGKQCQQADPCASNPCANGGHCTPFESHYICSCTPFFYGQTCKQDVN
ECAQSPLPCQNGGVCVNEVGTYRCQCPQEYTGKHCDTRYLPCNPSPCHNGATCVQKGDTT
YECSCVPGFSGQNCDTNIDDCPGHECHNGGTCVDGVNTYNCQCKPEFTGQFCTEDVDECQ
LMPNACQNGGTCHNIYSAYQCVCVNGWTGDDCGENIDDCANAACYQGAICHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPLGYIGAACDQDVDECSLGG
NPCEHGGKCLNTKGSFQCKCQPGFSGARCEHDVNECLSNPCQNEATCLDQIGGFHCICMP
GYEGLFCQINTDECANNPCLNNGKCIDKINTFHCQCPTGFAGNLCQIDIDECSSTPCKNG
AKCTDGPNKYTCECTEGYTGQHCETDINECFSDPCHYGTCKDGLASFTCYCRLGYTGRLC
ETNINECLSQPCRNGGICQDRENSYICTCPMGTAGINCEVNLDDCKSKPCDYGTCLDKIN
GYECACEPGYSGTMCNINLDECALHPCHNGGTCIDGINSFTCLCPEGYHDTTCFSQINEC
LSNPCIHGHCQDKVNGYNCLCDNGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCSCR
IGFTGPSCQTNINECASNPCLNQGTCIDDVSAYKCNCLLPYTGENCETLLAPCSPKPCKN
GGECQESEDYESFSCVCPEGWQGQTCEVDINECVKNPCLNGATCENTKGNYRCGCKAGYA
GRNCETNIDDCKPNPCSNGGFCRDEVDNFVCTCLLGFRGTKCEEDINECDSNPCKNGANC
TDCVNSYTCTCPPGFSGIHCENNTPDCTESSCFNGGTCVDGINTYTCLCPPGFTGSYCQH
DINECDSRPCLNGGTCQDSYGTYKCICPQGYTGLNCQNLVRWCDSSPCQNGGTCWQTGTT
YSCECQTGWTGLYCDVPSVSCEVAAKQRGVEVIALCRNSGQCLDAGNTHYCHCQAGYTGS
YCEEQVDECIPNPCQSGATCTDFLGGYSCKCVPGYVGTNCSNEINECFSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINIDDCNPFTDPVTNEPKCFNKGKCVDRVGGYHCICPAGYV
GERCEGDVNECLSNPCDTRGTHNCVQLTNNYRCDCRTGYTGQRCDTVFDGCKSKPCRNGG
TCAVASNTPHGFICKCPPGYTGSTCEYDAHSCGSLHCRNGGTCISGHKSPKCLCPSSFTG
PECEYPTDSPCNTNPCYNGGTCEYSSEAPYYHCVCPTNFNGLLCHILDYSFLGGFGRDIT
PPPEVEVSCEIPQCEERKGNKFCDTLCNNHACGWDGGDCSLNFNDPWKNCTSSLQCWRYF
NDGKCDEQCNNAGCLYDGFDCQNLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLAVGRLVIVVHIMPDQLRNNSLGFLRELSRVLHTNVVFRQDSKGEMMIYPYY
GSEQELNKHNIKRSVGWTEIPGTMLSSMRNSLYTIASENSRRRRELDSMLIKGSIVYLEI
DNRQCFQQSTECFQSATDVAAFLGALASSGNLNIPYIIEAVHSEVDPQPPSELYPIYAVL
AGLALLAFVGVGMVASRKRRREHGQLWFPEGFKISEPNKKKRREPVGEDSVGLKPLKNLS
DISLMDDNQNEWGEEEPSDAKRFRQFEEQAILDLDGQTDHRQWTQQHLDAADLRIPSIAP
TPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDASANVISDFIYQGAN
LHSQTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGKTPLHAAVAADAQGVFQI
LIRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAVN
NVEAATVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLEHFANREITDHMDRLPRD
IAQERMHHDIVRLMDEYNLVRSPPMHSHGHGGSMGTTLSPSLCSPNSYLGSMKPLVQSKK
ARKHSAKGIGYKDGKDMKNKKKTSQDGKGGGLLDSSAVLSPVDSLESPHGYISDVASPSM
MTSPFQQSPSMSLNHLQGMSDHMGVNHMGMPNKQELARMQFDPLPPRLTHLPLSGSNGSV
GMNGQCDWLSRMHASMGQSGQFNQMRVGPVGGQGSLHQGGGQHGMMTSLHTGLPTTSLSQ
MLSYQGLQNTRLASQPHPMQQVQQQMQMQHQQNLQQQLQQQQQSIQLQHQNSSTGSSGHA
SNQNFISTELSGSEIQQGTGNQGSIPIHTILPQETQIMSQNLPSTQYLTPPSQHSYSGPM
DNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSSMQSQMGHIPDQ
FK
NT seq
7569 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctttctttgtgaaactaactttcctgttgtcgctgattgttctaacacgaggt
ttaagatgctctatgtccaccgagttgtgtttgaaactggggaggtgtgaggcaacagct
gatggaaatggagagtgcaagtgtcgggatggatttgtagggagcaagtgtcagcaccgg
gacccttgcatctcctctccgtgtaaaaatggtggctcgtgtcacacggtaccccgtggg
aactcagtggactccacgtgttcctgccaaccgggcttcacggaccgcctgtgtctcacg
ccaatcgacaacgcttgtctcagctctccctgccggaacggtggcacctgcgatctggtc
aacctcagagagtacaagtgtagatgtccccctggctggtcaggtaagcagtgccagcag
gcagacccctgtgcttctaacccctgtgccaacggcgggcattgcacccccttcgagtcc
cactacatctgttcctgcacccccttcttctacggtcagacctgcaagcaggatgtcaat
gaatgtgcccagagccccttgccctgccagaacggaggggtatgtgtgaacgaggtgggc
acctaccgctgccagtgtccccaggagtacacaggcaagcactgcgatacccgctaccta
ccgtgcaacccctccccctgccacaacggggccacctgcgtccagaagggagacaccacc
tacgaatgctcctgtgtgccaggtttctcgggtcagaactgtgacactaacattgacgac
tgtccaggacacgagtgtcacaatggcggaacctgcgtggacggggttaacacctataac
tgccaatgcaaaccagaattcacaggccagttctgtacagaggacgttgacgagtgccaa
ctgatgcccaacgcgtgccagaacggtggaacgtgccacaacatctacagtgcctaccag
tgtgtctgtgtcaacgggtggacgggcgatgactgtggggagaatattgacgactgtgcc
aatgccgcctgctatcagggtgccatctgccatgaccgtgtggcgtccttcttctgcgag
tgtccccatggtcgcacaggtctgttgtgtcacctggatgacgcctgtattagtaacccc
tgtcagaaaggctctaactgtgacaccaaccccgtcaatggcaaggccatctgcacctgt
ccccttggctacattggcgccgcttgtgaccaggatgttgacgaatgctcactaggtggc
aacccctgtgagcatggagggaagtgcctgaacaccaagggttcgttccagtgtaagtgt
cagcccggcttctctggagctcgatgtgaacacgacgtcaacgagtgcctctccaacccc
tgccagaacgaagccacgtgcctcgaccagataggaggtttccactgcatctgtatgcca
ggctatgagggactgttctgccagatcaatactgacgagtgcgccaacaacccctgcctg
aacaatgggaaatgtatcgacaagatcaacaccttccactgccagtgccccacaggattt
gctgggaacctttgccagatagatattgatgagtgctccagcacgccttgcaagaatggc
gccaagtgcacagatggccccaataagtacacctgtgaatgcactgaaggttacacgggg
caacactgtgagaccgacatcaatgagtgtttctcggacccctgtcactatggtacttgt
aaggatggcctggcctccttcacctgctactgtcgccttggttacacgggccggctgtgt
gagaccaacattaacgagtgtctgagtcagccctgtcggaacggaggcatctgccaggac
cgcgagaactcctacatctgcacctgccccatgggcaccgcaggtataaactgtgaagtc
aacctggacgactgcaagagcaagccatgtgactacgggacatgcctcgacaagatcaat
ggctacgagtgtgcctgtgagcccggctacagcgggaccatgtgcaacatcaaccttgac
gaatgtgccctacacccgtgtcacaacggtggcacctgcattgatggcatcaacagcttc
acctgtctgtgtccagagggctaccatgacaccacctgcttctcccagatcaatgagtgc
cttagcaacccgtgtatccatggccactgtcaggacaaagtcaatggttacaactgtctg
tgtgacaatggctggagtggcaagaactgtgacatcaacaacaacgagtgtgagtccaac
ccctgcatgaacggaggcacctgcaaggatatgacgagcggatatgtctgctcctgcaga
atcggcttcactggtccaagctgtcagaccaacattaacgaatgtgcctccaatccctgc
ctgaaccaagggacctgcatcgatgatgtctctgcgtacaagtgcaactgcctactgcca
tatactggtgagaactgtgagaccctgctggcaccctgcagccccaagccctgcaagaac
ggaggtgagtgtcaggagtctgaagactacgagagcttctcctgtgtgtgtccagagggc
tggcaaggacagacctgtgaagtggacattaacgagtgtgtaaagaacccctgtctcaat
ggggccacctgtgagaacaccaaaggcaactaccgctgtggctgcaaggccggttatgct
ggccgcaactgtgagaccaacattgacgactgtaagcccaacccctgcagcaatggaggt
ttctgtcgggacgaggtggacaactttgtgtgcacctgcctgcttggtttccgtggcact
aagtgtgaggaggacatcaacgagtgtgacagtaacccatgtaagaatggagccaactgt
acagactgtgtcaacagctacacctgcacctgtccacctggcttcagtgggatacactgt
gagaacaacacacccgactgcactgagagctcttgtttcaacggtgggacgtgtgtggac
ggcatcaacacctacacctgcctgtgcccacctggcttcactggcagctactgccaacac
gacatcaacgagtgtgactccagaccctgcctgaacggaggcacctgccaggacagctat
ggcacctacaagtgcatctgtccccagggctacactggactcaactgccagaatctggta
cgctggtgtgactcgtccccatgtcagaacgggggcacctgttggcagactggcactact
tacagctgtgagtgccagactggctggacagggctctactgtgatgtgccaagcgtctcc
tgcgaggtggcagccaaacagagaggtgtggaggtaattgctctgtgtcgtaactcaggc
cagtgtctggatgcggggaacacccactactgccactgccaggcaggttacacaggcagc
tactgtgaggagcaggtggatgagtgcatccccaacccctgtcagagcggagccacctgc
actgactttctaggagggtactcctgcaagtgtgtgccgggatacgtcggcaccaactgc
tccaatgagatcaatgagtgtttctcccagccgtgccagaacggaggcacctgcattgac
ctgatcaatacctacaaatgctcctgtcccaggggaacccaaggcgttcactgtgagatc
aacatagacgactgcaaccccttcacagaccccgtcaccaacgagcccaagtgcttcaac
aaggggaagtgtgtggacagggtgggaggttaccactgtatctgtcccgccggttacgta
ggggagcgctgtgagggggacgtcaacgagtgcctgtccaacccatgtgacacccgcggt
acacacaactgcgtccagctcaccaacaactaccgctgtgattgccgtaccggatacaca
ggccagcgttgtgacacagtgtttgacggctgtaagagcaaaccctgtcgtaacggaggg
acatgtgccgtagccagcaacactcctcacggcttcatctgcaagtgtccacctggctac
actggctctacctgtgagtacgatgcccactcctgtgggagtctccactgtcgtaatggt
ggcacctgcatctccggacacaagagccccaagtgtctctgtccctcctcgttcacaggg
ccagagtgtgaataccctacagacagcccctgtaacaccaacccctgctacaacggggga
acctgtgagtacagctcagaagctccatactaccactgcgtatgccccaccaacttcaac
ggcctgctatgtcacatcctggactacagcttcctgggtgggttcggccgtgacatcacg
cccccgccagaggtggaggtgagctgtgagatcccccagtgtgaggaaagaaaggggaac
aagttctgtgataccttatgtaacaaccacgcatgtggctgggacgggggcgactgctcg
ctcaacttcaacgacccgtggaagaactgcacgtcgtccctgcagtgctggcgctacttc
aacgacgggaagtgtgacgagcagtgcaacaacgccggctgtctctacgatggctttgac
tgtcagaacctggagggccagtgcaaccctctgtacgaccagtactgtaaagaccactat
gcggacggccactgtgatcagggctgcaacaacgctgagtgtgagtgggatggtctggac
tgtgccaacaacatgccagagaagctggcggtgggccgcctggtcatcgtggtccacatc
atgcccgaccagctccggaacaactcgcttggcttcctgcgcgagctgagccgcgtactc
cacactaacgtggtgttccggcaggactccaagggagagatgatgatctacccgtactac
ggcagtgagcaggagctgaacaaacacaacataaagcgctcagtgggttggacagagatc
cctggcaccatgctcagctccatgaggaatagcctgtatactatagccagtgaaaacagc
cgcagacgcagggagctggactccatgctgatcaaaggctccatagtgtacctggagatt
gacaaccgccagtgctttcagcagtccacagagtgcttccagagtgccactgatgtagca
gccttcctgggggccctggcctccagtggaaacctcaatattccctacatcatagaggct
gttcacagtgaggttgacccccagcctccatctgagctttaccccatctacgcagtcctg
gctgggctggccctcctggctttcgtgggtgtggggatggtcgcctcacggaagcgtcgt
cgcgagcacggccagttgtggttcccggagggcttcaagatcagtgagcccaacaagaag
aagaggagggagccggtgggggaggattcagtgggattgaagccactgaaaaacctctcg
gacatatcactgatggacgacaaccagaatgaatggggagaagaggagccttcggacgcc
aagcgctttaggcagtttgaggagcaggcgatactggacctggacggccagacagaccac
cgccagtggacccagcagcacctggacgcggctgatctccgtatcccctccatcgccccc
acaccccctcagggcgagatcgagaacgactgcatggacgtcaacgtacggggaccagat
ggcttcacccccctgatgatcgcctcctgtagcggtggaggtctggaaacaggtaacagc
gaggaggaggaagacgcctctgccaacgtgatcagtgatttcatttaccagggtgctaac
ctccacagtcagacagaccgcacaggggagaccgcccttcatctcgctgcccgctacgcc
cgctctgatgctgccaagcgtcttctggaggccagtgcagatgccaacatccaggacaac
atgggcaagaccccgttacatgctgccgtggccgctgatgcgcagggtgtcttccagatt
ttgatccggaatcgtgccacagacctggatgcccgcatgcacgatggcaccacccctctg
atcctggcagctcgcctggcagtggagggcatggtggaggagctcatcaactgccatgct
gacgtcaacgctatcgatgactttggcaaatctgctctgcactgggcagcagcagtgaac
aacgttgaagcagctaccgtactactgaagaatggagccaacaaggacatgcagaacaac
aaggaggagacccctctgttccttgctgccagggaaggaagctacgagacggccaaggtc
ctgctggagcactttgccaaccgcgagataactgatcacatggaccggctgccccgagac
atagcgcaagagaggatgcaccatgacattgtccgtctcatggacgagtacaacctggtc
cgcagcccgcccatgcacagccacggccatggaggctccatgggcaccactctgtcgccc
tctctctgctcccccaacagctacttgggcagcatgaagcccttagtccagagcaagaag
gcccgcaagcacagcgccaagggcatcggctacaaggacggcaaggacatgaagaacaag
aagaaaacctcccaggatgggaagggaggaggtctgttggacagctcagctgttctgtcc
cccgtggactccctggagtctccacacgggtatatctctgacgtggcgtccccttccatg
atgacctcccccttccagcagtccccgtccatgtcactcaaccacctccaggggatgtcc
gaccatatgggggtcaaccacatgggcatgcccaacaagcaggagctagcgcgcatgcag
tttgacccgcttccgccccgtctcactcaccttccgttgtcaggctccaacggctctgtg
ggcatgaatggccagtgtgattggctctccaggatgcacgccagcatgggccagtccgga
cagttcaaccaaatgagggttggtcctgtcggggggcagggcagtctgcaccagggaggc
gggcagcacggcatgatgacctctctccacaccgggcttcccaccaccagcctgtcccag
atgttgagctaccagggcctgcagaacacccggttggcctcgcagccgcaccccatgcag
caggtccaacagcagatgcagatgcagcaccaacagaacctacaacaacagctccaacag
cagcaacagagcatccagcttcagcaccagaactctagcaccggcagcagtggccatgcc
agcaaccagaacttcatcagcaccgagctgagtggctcagagatccagcagggcacaggg
aaccagggctccatacccatccacaccatcctgccccaggagacccagatcatgagccag
aacctgcccagcacccagtacctcacccctccctcccagcacagctactccggccccatg
gacaacacccccaaccaccagctacaagtccccgaccacccctttctgaccccctccccc
gggtctcccgaccaatggtccagctcatccccgcattctaacatgtctgactggtcggag
ggcatctcaagtccaccaaccagcagcatgcagtctcagatgggacatatccccgaccag
ttcaagtag
DBGET
integrated database retrieval system
