KEGG   Oncorhynchus mykiss (rainbow trout): 110525478
Entry
110525478         CDS       T07259                                 
Name
(RefSeq) negative elongation factor B isoform X1
  KO
K15180  negative elongation factor B
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110525478
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:omy03021]
    110525478
Transcription machinery [BR:omy03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     110525478
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 110525478
NCBI-ProteinID: XP_021461284
Ensembl: ENSOMYG00000045493
LinkDB
Position
6:complement(21745476..21764123)
AA seq 583 aa
MFAGLPELGISNGEDLKETLTNCTEPLKAIDQFQTENGILLPTLQSALPFLDLHGTPRLE
FHQSVFDELRDKLMERVATIAEGKDEDRYGKLKELLEKSFPLVKMPSIQPVVMQVLKHLP
KVPEKKLKLVMADKELYKVCAVEVKRQIWQENQALFGDEVSPLLKQYIVAKEAALFSSDL
SILHNFFSPSPKARRQGEVVLKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAEL
LMSLHDLDISEICSVDSCHKFTWCLDACIREKFVDAKRARELQGFLDGVKKGQEKVLGDL
SMILCDPFSSNTLVLSTVRNLQELLSQDALPRDSPDLMLLLRMLSLGQGAWDMIDSQVFK
EPRLELEVVTRFLPAMLSVLVDDYTFTVEQKLPSEEKTSLSYPTALPDNFNKYLQENRVA
CEMGLYYALHIAKQRNKNALQRLLPALVETYNDMAFGDIFLHLLTAHLTLLSDEFGTEEF
CSAVFDGFLLNSFSSKDNVHRHNLRLLLHLHQKVLPSCVETLVKTLEPSKQSSDQVKELY
TKLTEKLEAQKKSPPQPDEAPSLDLGLHPVKVPTTASTPTTSL
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgtttgcgggcctgcctgagcttgggatatctaatggcgaggatctaaaagaaacactg
accaactgcacagagcctctgaaagccattgaccagtttcagacagaaaatggcattttg
ttaccaactcttcaatcagctcttcccttcctggaccttcatggaactcctcggttggag
tttcaccagtctgtctttgacgagcttcgtgacaagttgatggagcgagtcgctactatc
gcggagggcaaggatgaggaccgttatggtaaacttaaagagctgctggagaagagcttt
ccgctggtgaagatgccttccattcagccagtggtcatgcaggtgctgaagcatcttcca
aaggtaccagagaaaaagctgaagcttgtgatggctgataaggaactgtataaggtctgt
gctgttgaggtgaagaggcagatctggcaggaaaaccaggctctcttcggagatgaggtc
tcgcccttgctcaagcagtatatcgtggcaaaggaggcagcacttttcagcagcgatctc
tctattctgcacaacttcttcagcccctcccctaaagcaagacgccaaggagaggtagtc
ttgaaactgacccagatgattgggaagaatgtgaaactatatgacatggtgctccagttt
ttgcgaacacttttcctgcgtactcgtaatgtccactactgcaccttgcgtgcagagttg
ctcatgtccctccatgacctggacatcagtgagatctgctcagtagactcctgccacaag
ttcacctggtgcttagatgcctgtatccgtgagaagtttgtggatgccaagcgagcccgg
gagttgcaaggttttctggatggagtgaagaaaggacaggagaaagtacttggggacctg
tccatgatactgtgtgacccattttccagtaacaccctggttttgagtacggtccgaaac
ctgcaagaattgctaagccaggatgctctacccagagacagtccagacctgatgctgtta
ctcagaatgctgtctcttggacaaggtgcttgggatatgattgacagccaggtctttaaa
gagcctcgattggaactggaagttgtgacccgttttctcccagccatgttgtcagtactt
gtggacgactataccttcactgtagagcagaaactccctagtgaggagaagacctccctc
tcctaccctacagccctgcctgataacttcaacaagtacctgcaggagaacagggtggct
tgtgagatgggtctgtactacgcactccacattgccaagcagaggaacaagaatgcctta
caaaggttacttcccgcattggtggagacctacaatgacatggcctttggggacatcttc
ctgcacctcctgacagcacacctcaccttgctctctgatgagtttgggactgaagagttc
tgctctgctgtgtttgatggcttcctcctcaactctttctccagtaaagacaatgtccac
agacacaacctacgcctgttgcttcaccttcaccagaaagtgctgccatcttgtgtggag
accttagtgaaaaccctggaaccctcaaaacagagcagtgaccaggtaaaggagctgtac
accaagctgaccgagaaactggaggcccaaaagaaaagtcctccccagccagacgaagcc
ccctccctggacctggggctccatcctgttaaagtgcccactacagcttccactccaaca
acatcgctctga

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