Oncorhynchus mykiss (rainbow trout): 110525592
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Entry
110525592 CDS
T07259
Name
(RefSeq) sphingomyelin phosphodiesterase 4
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00600
Sphingolipid metabolism
omy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
110525592
Enzymes [BR:
omy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
110525592
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
110525592
NCBI-ProteinID:
XP_021461516
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All DBs
Position
6:25391698..25399930
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AA seq
714 aa
AA seq
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MSSSDHLKTDWTIKSLPQQCTEMTKDINDKPVKELCVIFPWMVERVVGSLDGSTVGWSLS
SLQAHSSDYSNVLEFLQPSGPMLKLVYKLQAEDYNFEIQVANLPGVISNSRIFLNKLPSQ
SHQRLSLNAFEYFMFYFATSVITQRDHHSGQQTSISNSVYFALVDAYFKHFLPTEGSPHS
DVKGTLTSHIPRSSRYSETSKGLLKCQCPVNTETTNQSIWRSGTMLQIFLEIWLPHFPLE
THQKLNEVSVITEEHILVVRQLVKHMHALSGKTKLDQSDILPSAHSETYLSEDFKRVVTS
EYVQRLYLLLLHCFKQWPMEKSFRAVLETWLSYIQPWRYQKHVYSENKEKWASFIQENIP
MYTRLFSFFLKRFAHVDLVNVDNATMVFRMTKVFAQTSLPELIENGEKLLLHQGPLLPST
LMASQVQPTDIAALPKTHINNKKLQMFGVEMRAEVLKLVQRLMQAQQTAKTTLDPPANVS
VGQFLCSWKRLILKTNSESGGNDMTKSDMKTVELLKKTVDHLNQVFNLNTGHLSQMMMNM
GSVEESKQLPDCIHSENGLILTDLGRMQIINGLRRFDIEYQGDPQLQPVRSYENAVLVQL
MFWIATLINNKLEGHMNDLCSQQNLLGRLGQHYFITSSVKGRFPRSTVTQQSQDDYHLRP
RLTLRTFASYRTLLILLLLYSLGSLFSISPLFSTCLILMLSFLYGLCMTVYVGK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcggatcatctgaagacagattggacaatcaagtcactcccacagcaatgc
acagagatgacaaaagacattaatgataaacctgtcaaggagctatgtgttatcttcccc
tggatggtggagagggttgttggcagcctggatggcagcactgttggttggagtctttct
tctctgcaagcccacagcagtgactacagcaatgtactggagttcctacaaccaagtggc
ccaatgctgaaacttgtttataaacttcaagctgaagactacaactttgagatccaagtc
gccaatttacctggggtcatttcaaatagccggattttcctcaataaattaccctctcag
agtcatcagagattgtcactcaatgcctttgagtacttcatgttttattttgccacaagt
gtcattacacagagggatcaccactcagggcagcaaacctccatctcaaacagtgtctac
tttgccttggtggatgcatatttcaaacacttcctccctacagaaggatcccctcactca
gatgtcaaaggcaccttgacctcacacattccaaggtcctctaggtatagtgaaacaagc
aaaggcctgttgaaatgccagtgccctgttaacactgagacaaccaatcagagtatctgg
agatcagggactatgctacagatatttttggagatatggctgccacatttccccttggag
acacaccagaagcttaatgaggtctctgtcatcacagaggagcacatactggtggtgaga
cagctggtgaagcacatgcatgccctctctggaaaaacaaaactagaccagtctgatatc
ttaccttctgcccactcagaaacctatctctcagaagattttaaaagagtggtcacatca
gaatatgtacagaggttgtaccttctcttgctgcactgcttcaaacagtggcctatggag
aaatccttcagagcagtattggagacgtggcttagttacatccagccctggagataccaa
aaacatgtgtacagtgaaaacaaagagaaatgggcctctttcattcaggagaatattccc
atgtacaccaggctattcagcttcttcttgaaaagatttgctcatgtcgacctcgtcaac
gtcgacaatgcaaccatggttttcaggatgacaaaagtatttgcccaaaccagtcttcca
gaattgattgaaaatggagaaaaattgctattgcatcaaggtcccctcctcccatccact
ctgatggcatctcaggtgcagcccactgacatagctgccctgcccaagactcacatcaat
aacaagaaactacaaatgtttggggtagaaatgcgagccgaggtgctgaaactggtccag
agactaatgcaggcccaacagactgcaaaaaccacattggatccgccagccaatgtatca
gttggccagtttctctgttcctggaagaggttgattcttaaaaccaattcagaaagtggg
gggaatgacatgaccaagtctgacatgaagacagtggagctactaaagaaaactgtggac
cacctcaatcaggttttcaatctcaacacaggtcatctatctcagatgatgatgaacatg
gggtcagtggaggaatccaagcagctccctgactgtattcacagtgaaaacgggctgatc
ctgacagaccttggcaggatgcagattatcaatggccttcgcagatttgatattgagtat
caaggggacccacagctgcagcctgtgagaagctatgaaaacgcagtcttggtgcagctc
atgttttggatcgccacactaatcaataacaaacttgaaggacacatgaacgatctgtgc
tcacaacagaacctgctgggaaggctgggacaacactactttatcacctcctctgtaaaa
ggaaggttcccaaggagtacagtgacacagcaaagccaggacgactaccacctgcggcca
cgccttaccctgcgcacatttgcgagttatcgcacattactcattctcctgttactctac
tcgctgggatctctgttttctattagcccactgttcagcacatgcctcatcttaatgttg
agctttttgtatgggctgtgcatgactgtctacgtgggaaagtaa
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