Oncorhynchus mykiss (rainbow trout): 110525643
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Entry
110525643 CDS
T07259
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00061
Fatty acid biosynthesis
omy00071
Fatty acid degradation
omy01100
Metabolic pathways
omy01212
Fatty acid metabolism
omy03320
PPAR signaling pathway
omy04146
Peroxisome
omy04216
Ferroptosis
omy04920
Adipocytokine signaling pathway
Module
omy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
110525643
00071 Fatty acid degradation
110525643
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
110525643
09143 Cell growth and death
04216 Ferroptosis
110525643
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
110525643
03320 PPAR signaling pathway
110525643
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
omy01004
]
110525643
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110525643
Enzymes [BR:
omy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
110525643
Lipid biosynthesis proteins [BR:
omy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
110525643
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of breast milk
110525643
Exosomal proteins of breast cancer cells
110525643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
110525643
NCBI-ProteinID:
XP_036835646
Ensembl:
ENSOMYG00000045821
LinkDB
All DBs
Position
6:complement(27545608..27560556)
Genome browser
AA seq
648 aa
AA seq
DB search
MRPPCDLNAQSIPVQGEPNWRRSALLKDDVLLEFYYDDTRTAYDMFQRGLRVAGDGPCLG
FRKPGEPYQWISYTEVAEQAQVLGSGLLGKGCQPNPEQLVGIFAQNRPEWIISELACYTF
SMAVVPLYDTLGEEAMVHILNLAEISLVICDKEEKAESLLGNKEKGVTPTLSCLVLFNPC
SDAIVERGKNCGVEILQLTQIMELGRQNLKDPAPPQPQDLAVVCFTSGTTGKPKGAMITH
GNIASNSSSVIKILEGSFVIQQEDVSISYLPLAHMFERMIQVSMLCHGARVGFYQGDISL
LMDDIKTLKPTFFPVVPRLLNRIYDKILGSVTSPLRRAVLHYAVRRKQAELSSGVVRNNS
LWDRLVFNRIQANLGGNLRFILTASAPISPTVLSFLRATLGCLIFEGYGQTECTAGCTFS
MPGDWSAGHVGAPLPCAMVKLIDIPDMNYYAKNGEGEICIRGHSVFRGYLKDEEKTTEAL
DRDGWLHSGDVGQWLPNGTLRIIDRKKHIFKLSQGEYIAPEKIENVYMRCVPVLQVFVHG
DSLQSHLIGIVVPDPEVFIDWVKKRGIVGSYEELCQNPDVKKEVLEDMTAVGKEAGLKSF
EQVKDLHLHPEMFSVSNGLLTPTLKTRRVDIHRVFQEQITDMYSTTAI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccccttgtgatctgaatgcccagtctatccctgtacagggagagcccaattgg
aggcgttcagctttgctcaaggatgacgttctgttggagttctactatgatgacaccagg
acagcctatgacatgttccagagaggactgagggtggcaggggatggcccatgccttggc
ttcaggaaacctggggaaccttaccagtggatatcctacactgaggtggctgaacaggca
caggtgctgggctctgggcttttgggcaaaggctgccaaccaaaccctgagcagttagtt
ggaatatttgcccagaacagaccagagtggatcatttcagagctggcctgctacaccttc
tcaatggctgtggtgcccctgtatgacacacttggagaggaggccatggtgcatatcctc
aacctggctgagatctccctggtgatctgtgacaaggaggagaaggcagagtcccttctg
gggaataaggagaagggtgtgacgcctactctctcctgtctggtgctcttcaatccctgc
agtgatgccatagtggagagggggaagaactgtggagtggagattcttcaactcacacag
atcatggaacttggacgacagaacctcaaagatcctgcgccaccccaaccccaggacctg
gcagtcgtgtgcttcaccagtggaaccacaggaaagcccaagggagccatgatcacccac
ggcaacatcgcctccaattcctcctctgttattaagatcctggaggggtcatttgtaatt
cagcaagaggacgtgtcaatatcttacctgcctcttgcccacatgtttgagaggatgatt
caggtgtccatgctatgtcatggggccagggtaggattctaccagggggatatctccctg
ctcatggatgatattaagactctgaaacccaccttcttcccagtggtgcctcgcctactc
aaccgcatctacgacaagatcttaggctccgtgacgtccccattgcgccgggcagtgctg
cactatgcagtgaggaggaagcaggctgagctcagcagtggggtggtacgtaacaacagt
ctgtgggacaggctggtgttcaacaggattcaggctaatttaggaggtaatctgaggttc
atcctgaccgcctcggcccccatctcccccaccgtgctttccttcctcagggccaccctc
ggctgtctgatctttgagggctacggtcagactgaatgcacagcaggctgcaccttctcc
atgccaggtgactggagtgcaggccatgttggtgctccattgccctgtgccatggtgaag
ttgattgacattcctgatatgaactattatgccaagaacggagaaggagagatctgtatc
cgtggccacagtgtgttccggggatacctgaaagatgaggagaaaacaacagaggccctg
gaccgtgatggctggctgcacagtggagacgtgggccagtggctaccgaatgggacactt
cgcatcatcgacaggaagaagcacatcttcaagctgtcccagggagagtacattgcccct
gagaagattgagaatgtctacatgcgttgtgtccctgtgctacaggtctttgtgcacgga
gacagcctacagtctcacctgatcggtattgttgtgccagacccagaagtgttcattgac
tgggttaagaagaggggaatcgttggatcctatgaggaactctgccagaatccagatgtg
aagaaagaagtgttagaagacatgacagccgtggggaaggaagctgggctgaagtcattt
gagcaggtgaaggacctgcacctgcatccagagatgttcagtgtgagcaacggtctcctc
acccccactctgaagaccagacgagtggacatccacagggtcttccaggaacagatcaca
gacatgtatagcacaacagccatctag
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