Oncorhynchus mykiss (rainbow trout): 110525736
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Entry
110525736 CDS
T07259
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110525736
03036 Chromosome and associated proteins [BR:
omy03036
]
110525736
Spliceosome [BR:
omy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110525736
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
110525736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
LSM_int_assoc
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
RRM_occluded
HAT_Syf1_M
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
110525736
NCBI-ProteinID:
XP_021461810
Ensembl:
ENSOMYG00000013032
UniProt:
A0A8C7PVM5
LinkDB
All DBs
Position
6:complement(31428660..31445370)
Genome browser
AA seq
958 aa
AA seq
DB search
MAATGDADETQLQEMEEEAVMENEMDSDEEEGLGIENSDDEIDNSSEDEKENEAEIQRLE
EQLSINAFDYNCHVDLIKLLRQEGELPRLRKARQKMSELFPLTEEIWLDWLKDEIHLTEE
EPNREKVYELFETAMKDYICPEIWLEYAQYSIGGMGLPGGMEKVRSIFERALTAVGLHMT
KGATVWEAYREFENAILATVQPPPGSVPTREQQELLNAQLERIHTLFRRQLSIPLMDMDG
TYAEYEEWSDQGVSDTVSQKYKGALQEMEKSKPYEETLMIAEPPKLAEYQTYIDYEQKEG
DPARIQIIFERALSENCLVPDMWAKYTKYLDRQLKIKDLVLSSHNRAVRNCPWTMGLWKN
YLLALERHGADHHTISDVFERALNAGFIQATDYVNIWEAYLDYLRRRVDFSKGESTLTLE
SSRELEELRAAFTRSLDYMKQDVEERFSESGDPSCTIMQVWAKIEALHCKNMQKARELWD
SIMTKGNAKFANMWLEYYNLERSYGDALHCRKALHRAVQCTSDYPEHVCEVLLTFERVEG
SLEDWDAAVQKTETRLNRVNEQRAKVTEKEAHVTRQVEEKTEQRRRAKADKKNQKKGQKG
SRPGEKRKAEDKDYEDEWGEESEQPPKRHRREGDQGFRGGCGGAEEFMGTESGLFGRRAP
PGRRQEPPGTKRGQQVAPATLWKTQEDDPELRKDDCSVFISNLAFTMEDPEKRLKKLFEP
CGPVQSVRPVYAAKGFRGYCYVQFEGKASVVEALKMDRQEVEGRPMFVSPCVDKNKNPDF
KVFKYNTNLEKHKIFISGLPFSCTKEQLEELCKVHGTIKDIRLVTNRSGKPKGLAYVEFG
DEAQASQAVLKLDGTVLQEHTLSVAISNPPRRNTADKPGFSRPVGAMMPRSMVYGSRGKG
RTQLSLLPRSLHRQRGSESKAENGTAPKPTGGASGDAGIEAQAKPLSNSDFAKMLFKK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacgggggacgcagatgagactcagttgcaagagatggaggaagaggcagtg
atggaaaatgaaatggattcagatgaagaggagggtttgggaattgaaaattccgacgat
gaaatagacaattcatcagaagacgaaaaagagaatgaagccgaaattcagcgtttggag
gagcagctgtccatcaatgcttttgattacaactgtcatgtggacctcataaaactcctg
aggcaggagggggagctgcctcggctgcgtaaggcaaggcagaagatgagtgagctcttc
ccactcactgaagagatttggctggactggctcaaggatgagatccacctaacagaagag
gagccgaaccgggagaaagtctatgagctctttgagacggctatgaaagattatatctgc
cctgaaatctggctggaatatgcccaatactctatcgggggcatgggactgcctggtggg
atggagaaggtgaggtccatcttcgagagagccctgacagctgtggggctgcacatgacc
aagggggcgacagtgtgggaggcctacagggagtttgagaacgccatactggcaactgtt
cagccgccccctggcagcgttcccacccgcgagcagcaggagcttctgaacgctcagctc
gagcgcatccacactctgttccgccgccagctgtccatccccttaatggacatggacgga
acatatgcagagtatgaggagtggtctgaccagggggtgtctgatacagtctcccagaag
tacaagggggccctgcaagaaatggagaagagcaagccttatgaggagactctgatgata
gccgagccacccaagctggcagaatatcagacctacattgactatgagcaaaaggagggt
gacccagcacggatccagatcatctttgagcgggcattgtcagaaaactgcctggtacca
gacatgtgggcaaagtacaccaaatacctggaccgccaactgaagatcaaagacctggtc
ctgtcctctcacaaccgtgcggtcaggaactgcccctggaccatgggcctgtggaagaac
tacctgctggccctggagaggcatggggctgaccaccacaccatctcagatgtttttgaa
agggccctgaatgctggtttcatacaagccacagattacgtgaatatctgggaagcgtac
cttgattacctgaggcggcgcgtcgatttcagcaaaggtgaaagcaccttaacattggag
tcgagcagagagctggaggagctgcgggcagccttcacccggtccctggactatatgaaa
caggatgtggaagagaggtttagtgaaagtggagacccctcttgtactatcatgcaggtc
tgggcaaagatagaggccttgcattgtaagaacatgcagaaggccagagaactgtgggac
agcatcatgacaaaagggaacgccaaattcgccaacatgtggttggagtactataacctg
gagaggtcgtacggagatgctctccactgcaggaaagccctccacagggccgtccagtgt
acctccgactacccagagcatgtgtgcgaggtcctgctcacctttgagagggttgagggt
tctctggaggactgggatgcagcggtgcagaagactgagacacggctgaacagagtcaat
gagcagagggccaaggtgacagagaaagaggcccatgtgactcgccaggtggaggagaag
actgaacagcggcggagggccaaggcagacaagaagaaccagaagaagggccagaaaggc
agcaggcctggagagaagaggaaggcagaggacaaggattacgaggatgagtggggagag
gaatcggagcaacctccaaagaggcaccgaagggagggcgaccaaggcttcaggggggga
tgtggtggtgctgaggagttcatggggacagagagtgggctgtttgggaggagagccccc
cctggccgcagacaggaaccacctggtactaagaggggccagcaggtggcgccagccacc
ttatggaagacccaggaagacgaccccgagctacgcaaggacgactgcagtgtgtttatc
agtaacctggccttcaccatggaggatccagagaagaggctgaagaagttgtttgagccc
tgtggtcctgtccagtcagtgcgccccgtctatgctgccaagggcttcagagggtactgc
tacgtacagtttgagggcaaggcgtctgtggtcgaggccctgaagatggaccggcaagag
gtggaaggcaggcccatgttcgtatcaccctgtgtggataaaaacaagaaccctgatttt
aaggtgtttaagtacaacacaaacctagagaaacacaagatctttatctcgggcctgccc
ttttcctgcaccaaggagcagctagaggagctatgcaaggttcatggcaccattaaagac
atccgcttggtcaccaaccgctcaggcaaacccaagggtctggcgtacgtggagtttggg
gatgaggctcaggcctcccaggccgtgctgaagttggatggcacagtactacaggaacac
acactctctgttgccattagcaacccgcctcgcagaaacactgccgacaagcctggcttc
agcagacccgtgggagccatgatgccccggtctatggtctatggatcgaggggaaaaggg
cgcacccagctctcactactccctcgttcactacatcggcagagaggatcagaaagtaaa
gcagagaatgggactgcacctaaacccacagggggcgcatctggagatgctgggattgaa
gcacaagccaagcccttgtctaattcagactttgccaaaatgcttttcaaaaagtga
DBGET
integrated database retrieval system
