Oncorhynchus mykiss (rainbow trout): 110525744
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Entry
110525744 CDS
T07259
Name
(RefSeq) serine/arginine-rich splicing factor 9
KO
K21123
serine/arginine-rich splicing factor 9
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040
Spliceosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110525744
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110525744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110525744
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
SR proteins
110525744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
110525744
NCBI-ProteinID:
XP_021461827
Ensembl:
ENSOMYG00000013542
UniProt:
A0A8C7PYE6
LinkDB
All DBs
Position
6:31644703..31654452
Genome browser
AA seq
258 aa
AA seq
DB search
MADGRIYVGNLPADVQERDIEDIFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDCKLRVEHPRSASSKFNGSMGGSGRGSGDGGPGGPKGRFGPPTRRSEFRVIV
TGLPPTGSWQDLKDHMREAGDVCFTDVQRDGEGVVEFLRREDMEYAMRRLDRTEFRSHQG
ETSSIRVHGEMGGSRGRSRSRSRSRGRYSPAYQGRGSPPPRYQSPPARRLSRHSPPPRRP
SAAHRSPSSRSPPPRHYR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggcaggatctacgtgggtaaccttccagctgatgtgcaagagagggacatt
gaggatatattcttcaaatatggcaaaatcagagacattgagttgaagaacaacagaggc
actattccctttgcctttgtgcgctttgaagatccacgggatgccgaggatgcagtctat
gggaggaatggttatggatttggagactgcaagcttcgcgttgagcaccctcgctctgcc
tcctctaaattcaacggttctatgggtggtagtggtcgagggagtggggacggaggtccc
ggtggtcctaaagggaggtttgggcctcctactcggagatcagagttcagagttattgtg
actggcctacctccgactgggagctggcaagacttgaaagatcacatgagggaggctgga
gatgtttgtttcacagatgttcagcgggatggtgaaggggtggtggagttcctgcgcaga
gaggacatggagtatgccatgcggcgcctggacaggacagagttcagatcacaccagggg
gagacttcatctatccgagtccatggagagatggggggcagcagaggacgctcgcggtcc
cgttccagatccaggggacggtactcacccgcttatcaaggtcgcggctctccaccccct
cgttatcagtcgccccctgctcgtagattgtctcgccatagcccccctccacgtcgcccc
tctgcagcacaccgtagcccatcaagccgcagcccaccccctcgtcactaccgatag
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