Oncorhynchus mykiss (rainbow trout): 110525771
Help
Entry
110525771 CDS
T07259
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137
Mitophagy - animal
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110525771
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110525771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110525771
03009 Ribosome biogenesis [BR:
omy03009
]
110525771
04131 Membrane trafficking [BR:
omy04131
]
110525771
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110525771
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110525771
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
110525771
Membrane trafficking [BR:
omy04131
]
SNARE
SNARE associated proteins
Others
110525771
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110525771
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110525771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
nSTAND3
AAA_28
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_7
AAA_18
ATPase
ABC_tran
DUF815
AAA_24
NB-ARC
TsaE
ResIII
Viral_helicase1
Sigma54_activat
NACHT
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
110525771
NCBI-ProteinID:
XP_036835800
Ensembl:
ENSOMYG00000028344
LinkDB
All DBs
Position
6:32003116..32013034
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKTRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRESVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRF
GRFDKEVDIGIPDATGRLEILQIHTKNMKLNDDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWGDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRECIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSNAAGG
SGPSQGTGGTGGGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaggagaatccaaaaatgatgacctttccactgcgattctgaagcagaag
accagaccaaacagattgattgtcgatgaatccataaatgaggacaacagtgtggtctct
ctctctcaggcaaagatggatgagctgcagctgttccgtggcgacacagtgctgatgaag
gggaagaagcgcagggagtctgtgtgtattgtcctgtctgacgacacctgctctgatgag
aaggtccgcatgaaccgtgtggtccgcaacaatctccgtgtccgtctgggggatgtcatc
agtatccagccgtgtcctgatgtaaagtatgggaagaggattcatgttctgcctattgat
gacacagtcgaagggatcactggcaacctgtttgaggtctatctcaaaccctatttccta
gaggcctacaggcccatccgcaagggtgatatcttcctggttcgtgggggtatgcgtgcg
gtggagttcaaggtggtagagaccgaccccaacccctactgcatcgtcgccccagataca
gtcatccactgcgagggagagcctatcaggagagaggatgaggaggagtccctgaatgag
gtgggctatgatgatatcggaggagtgaggaagcagctagctcagatcaaggagatggtt
gagctgcctctcagacaccctgcactgttcaaggctataggagtcaagcccccccgtggt
atcctgctatacggacctcccggtactggaaagaccctgattgccagagctgttgctaac
gagaccggagccttcttcttcctcatcaacggtcctgagattatgagtaagctggctggg
gagagtgagagcaacctgaggaaggcctttgaggaggctgagaagaactctcctgccatc
atcttcattgatgaactggacgctatcgctcccaagagagagaagactcatggagaagtg
gagaggcgtatcgtgtctcagctgctgaccctgatggacgggctgaagcagagagctcat
gtcattgtcatggcagccaccaacagaccaaacagcatagatgctgcacttagaagattt
gggcgttttgacaaggaggtggacattggtatccctgatgctacaggcagactggagatc
ctgcagatccacaccaagaacatgaaactgaatgacgatgttgaccttgagcaggtggct
aatgagacccacggccacgtgggtgctgatctggctgccctgtgctcagaggctgctctc
caggccatcaggaagaagatggacctcatcgacctggaggacgagaccatcgatgcggag
gtcatgaactcccttgcagttaccatggacgactttaggtgggctctaagccagagtaac
ccatcagctctgagggagacggtggtggaggttcctaacatcacctggggggacatcgga
ggactggaagacgttaagcgggagctgcaggagctggtgcagtacccagtggagcaccca
gataagttcctgaagttcggtatgactccttcaaagggagtgttgttctacgggcctccg
ggttgcggtaagaccctgctggccaaggccattgccaatgagtgccaggccaacttcatc
tccattaaaggacctgagcttctcaccatgtggtttggagagtcagaggctaatgtcagg
gagatctttgacaaggctcgccaggcagccccatgtgtgttgttctttgacgagctggac
tccatagcgaaggcccgtggaggtaatgtgggagacggtggcggtgcggccgaccgtgtc
atcaaccagatcctgactgagatggacggcatgtccagcaagaagaacgtcttcatcatt
ggagccaccaatcgccctgacatcatcgaccctgccatcctccgacctggccgtctggac
cagctcatatacatccctttgcctgatgagaagagcaggatcaatattctcaaggctaac
ctccggaagagccccattagcaaggatgttgatctggacttcctggctaagatgaccaat
gggttctcaggtgctgaccttacagagatctgccagcgggcctgtaagctggctatcaga
gagtgcattgagaacgagattcgccgagagagggagaggcagaccaacccctctgctatg
gaggtggaagaagacgaccctgtacctgagatcaggaaggaccactttgaggaggccatg
cgattcgcccgccgttccgtcagtgacaatgacatccgcaaatatgagatgtttgcccag
acactgcagcagagccgaggatttggcagcttcaggttcccctccaatgctgcagggggc
agcggtcccagccagggtactgggggcactggtggggggccagtgtttaacgaggataat
gatgatgacctgtacggatag
DBGET
integrated database retrieval system
