Oncorhynchus mykiss (rainbow trout): 110525876
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Entry
110525876 CDS
T07259
Name
(RefSeq) nucleolysin TIA-1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110525876
03041 Spliceosome [BR:
omy03041
]
110525876
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110525876
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110525876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Flg_new_2
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
110525876
NCBI-ProteinID:
XP_021462030
Ensembl:
ENSOMYG00000005547
UniProt:
A0A8C7NR43
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All DBs
Position
6:complement(36970068..36987765)
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AA seq
391 aa
AA seq
DB search
MMMMMDDEQPKTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEH
RHAAASLAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDVKVAFG
PFGRISDARVVKDVATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP
APKTTYETNTKHLSFDEVVNQSSPSNCTVYCGGVGTGLTEQLMRQTFSPFGQIMEIRVFP
DKGYSFVRFTSHEGAAHAIVSVNGTSIEGHMVKCYWGKETTDMMSPMQQVQQVPQNKVGF
AAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAQAWNQQGFNHLPASAGWTGVSAL
SNGGVMEATQGLNGSMLANQAGMGATGYPTH
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatggacgacgaacagcccaaaaccctgtatgtagggaacttgtccaga
gatgtcactgagcccctcatcctacaggttttcacacagatcggaccctgcaagagctgt
aaaatgattgttgatactgcaggcaatgacccatactgttttgtggagttctatgagcac
aggcatgctgctgcatcactggctgccatgaatggacggaaaattatgggtaaggaggtt
aaagtcaactgggccacaacaccaagcagtcagaaaaaagacacaagcaatcatttccat
gtctttgttggagacctcagcccagaaatcaccacagatgatgtaaaagtggcctttggt
ccatttgggaggatatcggatgctcgtgtggtcaaagatgtggcgacggggaagtctaaa
ggctatggctttgtctctttcttcaacaagtgggatgcagaaaacgccattcagcagatg
ggtggtcaatggctaggcggcagacagatcaggaccaactgggccactagaaagccccca
gctcctaaaaccacctatgaaacaaacacgaagcacctgtcctttgatgaggttgtgaac
cagtccagccccagtaactgcactgtgtactgtggaggagtcggcactggtctaacagaa
caattgatgagacagaccttctccccctttggacaaatcatggaaatccgtgtgttccca
gacaaaggatactcttttgtgcgttttacctctcacgagggagcagcccatgccattgtg
tctgtgaatgggacttcgatagagggccatatggtgaagtgttattggggtaaagagacc
acagacatgatgagtcctatgcagcaggtgcaacaagttccccagaacaaagtgggcttt
gcggcccagccctacggccagtatgcccagtggtacggcaatgcccagcaaattggccag
tacgtccccaacgggtggcaggtacccacctatggggtttacggccaggcccaggcctgg
aaccagcagggttttaatcacttaccggccagtgctgggtggacaggtgtgagtgccctc
agtaacggtggggttatggaagctacacagggattgaatgggagtatgttagcaaaccag
gccggtatgggagccactggataccccacacactga
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