Oncorhynchus mykiss (rainbow trout): 110525921
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Entry
110525921 CDS
T07259
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein
KO
K10890
fanconi anemia group C protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
110525921 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110525921 (fancc)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
110525921 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
Motif
Other DBs
NCBI-GeneID:
110525921
NCBI-ProteinID:
XP_021462111
Ensembl:
ENSOMYG00000026138
LinkDB
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Position
6:39269915..39312098
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AA seq
582 aa
AA seq
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MSQAQTGSMAGLKPQEVAFWLGKAVEWGQTESPDTQRDTCLHLGPLRAFLQLLLTDIHMR
SSTTETMRTIPFVGQFLGRLCWNPYVTADAESRSLLLQSLWSLYSEEPHNAVERKANQWI
RNVLCQLATEEEDSATHMLVKHMGLPPKEYNVKVLRKLVWLLVEEVGESCSGLADPNQRC
SCDSVLAASVACVPLVTCPETAPLIGALLQRPVTCDKAALSQDFLDAVSSAYSRKCVSLE
AQAVVSLWCHNLASLEGAVMSLLDSVLSNPACIPHNLENTITHSLLPKACSQHGSIFLIV
NDIFRSMLVQVEGNQTLLSLIHTFTICFLRELAALQPQECVSLKAFFPHTPQSLLAPLLT
HPSEMAQEAWPEHLAWITASLQRLTEEEEEGNRGQCGVFEAWFLLVQCADWLEVANQLLV
SARPQDCGPLLWLLTFYHHPTNRGHQRTQQLVAAREVWDHLRSLFLLSAPPLPADRLQSL
AELMSAVPQQPSLDSLLVVSLLGNFAVFSHNPLSGAREIVRMVVQRSGLVREAVCVLNMV
ELRLNRERASSSLTDRVTLRTRALRGTLTHMAQHDTHTHGTT
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggcccagacgggatccatggctggcctaaagccccaggaggtagccttctgg
ctaggaaaggcagtggagtggggccagactgagagcccagacacccagagagacacctgc
ctccacctgggccctctcagggccttcctccagctcctcctcacagacatacacatgcgg
agctccaccacagagaccatgaggactattcccttcgtaggccagttcctcggccgcctc
tgctggaacccctatgtcactgcggatgctgagagccgctcactcctgctccagagtctg
tggagtctgtattcagaggaacctcataacgctgtcgagaggaaggccaaccagtggata
cggaatgtgttatgtcagcttgctacagaagaagaggacagtgcaacacatatgttagtg
aaacatatgggcctgccaccaaaggaatacaatgtaaaggttctaagaaagttggtgtgg
ttgctagtggaggaggttggggagagctgcagcggtttggctgaccctaaccagaggtgt
tcgtgtgacagcgttcttgctgcatcagtggcatgtgtccccctggtcacatgtcctgag
actgctcctctcattggtgcgttgctgcagcggccggtgacctgcgataaggcagccctc
agccaggacttcctggatgctgtaagctccgcctactccagaaagtgtgtgtctctggag
gcccaggcagtggtgtctctgtggtgccataacctggccagcctagagggggcagtgatg
tctctactggactctgtgctctccaacccagcctgcataccgcacaacctagagaacacc
atcactcactcactactgcctaaagcctgctcccagcacggctccatattcttaatagtg
aacgacatcttcaggtccatgctggtgcaggtggaggggaaccagactctgctatctctt
atccacaccttcaccatctgcttcctcagggaactggcagccctgcagcctcaggaatgt
gtgtccttgaaggccttcttcccacacacaccccagagcttactggcccctctgctgacc
catccttcagaaatggcccaggaggcgtggccagaacacctggcctggatcactgcatca
ctacagagactcactgaggaagaggaggaaggcaacaggggtcagtgtggagtgtttgag
gcctggttcctgctggtgcagtgtgctgactggttggaggtagccaaccaactactggtc
tcagccagacctcaggactgtggccccttgctgtggctcctcaccttctatcaccaccct
accaacagggggcaccagcggacacagcagctggtggcggccagagaagtctgggatcac
ctgaggtcactcttcctgctctcggctcctccccttcctgctgaccgactgcagtcattg
gccgagctgatgtcagccgtcccccagcagccgtccctggactcgctattggtcgtcagc
ctcctgggcaactttgcagttttctcccacaaccccctgagtggtgccagggagatagtc
cgcatggtggtgcagcgatcagggctggtccgtgaagcagtgtgtgttctcaacatggtt
gagctccgactaaacagagagagagcctcctccagcctcaccgacagagttacgctcagg
accagggctcttcggggcacactcacacacatggcacagcacgacacacacacacatggt
acaacatga
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