Oncorhynchus mykiss (rainbow trout): 110526086
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Entry
110526086 CDS
T07259
Symbol
tsc1a
Name
(RefSeq) TSC complex subunit 1a isoform X1
KO
K07206
tuberous sclerosis 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04140
Autophagy - animal
omy04150
mTOR signaling pathway
omy04218
Cellular senescence
omy04910
Insulin signaling pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
110526086 (tsc1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110526086 (tsc1a)
09143 Cell growth and death
04218 Cellular senescence
110526086 (tsc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
110526086 (tsc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110526086 (tsc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hamartin_N
CC_TSC1
TFCD_C
Rep-A_N
Motif
Other DBs
NCBI-GeneID:
110526086
NCBI-ProteinID:
XP_021462371
Ensembl:
ENSOMYG00000018376
LinkDB
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Position
6:complement(49897425..49928616)
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AA seq
1237 aa
AA seq
DB search
MAKEQSNVSDLLPLLESSDLHELDQIKSVLNDHLGTERGSVLLNGLVDYYLETSSPQAIL
ILCSVREPHDKHLLDKLNECMAKPACRLPTLTLLGHVIRKQPPWMHKITRFPLLTSLLKC
LKTDSDVVVLITGVLVLITLLPVIPQAGKQHIYDFFDIFGRLASWSLKNPGHVHGVYLIH
LHASVYSLFHRLYGMYPCNFVSYLRSHYSMKENVDTFEEVVKPMLGHVRIHPELVTGTND
YELDPSRWKRFEIHDIVIECAKVSLDPKEASCEEGYSSMPDRVTIHHHPHLRSGLDYTAS
PYTDFLSSFGSSASTPLSVGRPPLSLSLPQLPGTQSSLCSPHTSFHQNQHCEVDPAGNKV
SMWSPCSDCGMTTPPTSRGISPANVPELSQSASHAPSQTASTSGGKCLSPAPTLSNEFEH
LCSTPNTTNQLKQKPSGEEERGNPEVISKGAAGESVKTMSLTELSDFIKEQDLDIQRMEN
EHDEDAITEELLKLTEQKHKADRSFYSTTETLTGHQEKEMLLTTSNQSLNKEARRLVSTP
DKSECSAGGGDQQLPWSFRPCFTPIDNLLTGFSTSQSPYRAEEEGGSGLANYGLFSSPSI
FRDPVNPVYEPLFELALPRAASLFVGRKTSVALAQRAAGDEGERNASKGEEEGDEMAALS
PLEVLDRLIQHGNEAYEKVLKRLPMPNKSVDWTHFGGKQQSMKAKGTTPLDELHTLRSQV
LLLHNQLLYERYKREQHAIRNRRLLRRIINATAMEEQNNSMKAQLKLQDIEIQSLQASLV
EEQQRYRRLKEDGDTETACLHSQFQQLQQGHDLYLSKAQKLQSELQECQSNMGELEAELQ
KANNEAYNTGHQLTQLSLKLTNSENLQQQMYLLNKQLLLLGETNKLAIQEVQRLGPESSK
GLQMLQSSMGKEQECLRQSMLQQTQGLEAAQQRIGDLEAQLAKKEHLILEQKLFLEEVKG
QTKGQLQASESRYLAMRRVTQVLQTEMLQLYSQLDAEMLTTNQSLSESDTIEPSSAPPGT
SRPNGSSSRTVPTAQGSSDRRTQAWPPGNGGTLPPGGGAQSTTSVTLNGSLKQPPLLSEM
SPTHLAAFPLSLSPAGTPFTVGTYPSAKSFLGMHARELFCNKSDSQCDGDEDTQLSSLSH
SLVVGEESSESTENVQSSPFPPPATGTPPHSLPAAAPPSQGSAQSALAQEPPPSDSQQLR
AHHGQGARPRASAAAAARQRRKDLRIMDYNETQQEHI
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggagcagtcgaatgtgagcgacctcctcccgctcctggagtcgtccgatctg
catgaactggatcagataaaaagtgtcctcaatgaccacctcggcacagagcgaggatct
gtgctgctcaatggccttgtcgattactaccttgagaccagctctccacaggctatactc
atcctctgctctgtcagggagcctcatgacaagcacctcctggacaagctgaacgagtgc
atggccaagccagcctgtcggctgcccacccttaccctcctggggcacgttatccgcaag
caacccccctggatgcacaagataacccgcttccctctgctcacctccttactcaaatgc
cttaagacggactctgatgtggtggtgctgataactggagtcctagtgttgatcacactg
ctacccgtgataccccaggcagggaagcagcacatatacgacttctttgacatctttggc
cgactggcgtcctggagtctgaaaaacccagggcatgtgcacggggtgtatctgatccac
ctccatgccagtgtgtactccctcttccaccggctctatggcatgtacccctgcaacttt
gtctcctacctgcgctcccactacagtatgaaggagaacgtggacacctttgaggaagta
gtgaagccgatgttggggcacgtgcggatacatcctgaattggtcactggaaccaacgac
tatgagctggatccctccaggtggaagaggtttgagatccacgacattgtgattgaatgt
gcaaaagtctccctggaccccaaggaggcgtcctgcgaggagggttactccagcatgcca
gaccgcgtcaccatccaccatcacccccacctgcggtccggtcttgactacactgccagt
ccctacaccgacttcctcagcagcttcggtagctctgcctctacccccctatcggttggc
cgaccacctctctccctgtccttaccccagctaccagggacccagtcctccctctgcagt
ccccacacctctttccatcagaaccaacactgtgaagtcgacccagctgggaataaagtg
tcgatgtggagtccgtgctcggattgtggaatgaccacacctcccacctccaggggtatc
tcccctgccaatgttccagagctatctcaaagtgcctcccatgcccccagccaaacagcc
agcacatcaggtggtaaatgtctcagtcctgccccgactctctccaatgagtttgagcat
ctttgttcaacccccaacacaaccaaccagctgaagcagaaaccgagtggagaggaagag
agaggcaaccctgaggtcatcagtaaaggtgctgctggtgagagtgtgaagaccatgtca
ttgaccgagttgtcggacttcatcaaagagcaggatttggacattcaaaggatggagaat
gaacatgacgaggatgccatcacagaggagctcctgaagttgactgagcagaagcacaaa
gcagaccgctctttctacagcactacagagacactgactgggcatcaggagaaggagatg
ctcctcaccacctccaaccagagcctaaacaaggaggcccggcgcctggtctccacaccc
gacaagagcgagtgctcggcggggggaggagatcagcagctcccctggtccttccggccg
tgcttcacccccatcgacaacctgctgaccggatttagcacctctcagagcccctacagg
gctgaggaggaggggggctccggtctggcaaattatggcctgttctcctcccccagtatc
ttcagggaccctgttaaccccgtctacgagcctctgtttgagctggccctgcccagggct
gcctctctgttcgtggggaggaagacttcggtggcactggcacagagggccgctggcgat
gagggggagaggaacgcaagcaagggggaggaggaaggggacgagatggcggcattgtcc
ccgctagaggtcctggatcgcctcattcagcacggcaacgaggcctatgaaaaagtgctc
aagagattgcccatgccaaacaagtcagtagactggacacactttggaggtaaacaacag
agtatgaaagcgaaaggcaccacgccgctggacgagctgcacacgctgcgcagtcaggtg
ctgctgctccacaaccagctcctgtacgagcgctacaagagagagcagcacgccatccgc
aaccgccgtctgctccgccgcatcatcaacgccactgccatggaagagcaaaacaactca
atgaaggcccagctgaagctgcaggacatagagatccagtctctgcaggccagtctggtg
gaggagcagcagcgctacaggcgcctgaaggaggatggagacactgagacggcttgcctc
cacagtcaattccaacagctacagcagggccatgacctgtatctatccaaggctcagaag
ctgcagagtgagttacaagaatgccaaagcaacatgggagagctggaggctgagcttcag
aaagccaataatgaggcatacaacactggacaccagctcacccaactgtccctcaagctc
accaacagtgagaacctccagcagcagatgtacttgttgaacaaacagctgctgttactg
ggagagaccaacaagctggcaatacaggaggtgcaacgcctgggaccggagagcagtaag
ggactgcagatgctgcagtcatccatgggcaaggagcaggagtgtctgcgtcagagcatg
ctgcagcagacccaggggcttgaggcagcccagcagcgcatcggagacctggaggcccag
ctagccaagaaggagcacctcattctggagcagaagttgttcctggaggaagtcaaaggc
cagaccaagggccagctgcaggcgtcggagagcaggtacctggccatgcgacgggtcacc
caggtgctgcagacggagatgctgcagctctacagccagctggacgccgaaatgctgacc
accaaccagagtctctcggagtctgacaccatcgagccctccagcgctcctcctggcact
tccaggccaaatggcagcagtagcagaactgtgccaactgctcagggcagctctgaccga
cgcacccaagcgtggccgcctggcaacggaggcactttaccacccgggggtggagctcag
tccactacctcggtgaccctcaacggcagtctgaaacagccccctctcctgtcagagatg
tcccctacccacctggccgcctttccgctttccctatcccccgctggcacccccttcact
gtgggtacctaccccagtgccaagagcttcctgggaatgcacgcccgagagctgttctgc
aacaaaagcgatagccagtgtgacggggatgaggacacccagctcagtagtctctctcac
agcctggtcgtcggtgaggagagcagcgagtcgacagagaacgtccagtccagcccattt
cctcctcccgccacaggcacccccccccattctcttcctgctgctgctcctccatcacag
ggctctgctcagtctgctttggcccaggagccacccccgtcagacagccagcagcttagg
gcccaccacgggcagggggcaaggcctagggccagtgctgccgctgccgcccgccagagg
aggaaggacctgcggatcatggactacaatgaaacacagcaggagcacatctga
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integrated database retrieval system
