Oncorhynchus mykiss (rainbow trout): 110526142
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Entry
110526142 CDS
T07259
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
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Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
DUF948
Motif
Other DBs
NCBI-GeneID:
110526142
NCBI-ProteinID:
XP_021462456
Ensembl:
ENSOMYG00000042474
UniProt:
A0A8C7U9H6
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Position
6:complement(51372863..51398863)
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AA seq
884 aa
AA seq
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MDAPEYLDLDEIDFTDDSVYSVTSLKNIPELSRRNDGQGEERQAPAINWSRGVSSHSGGG
IKPTGIADVHSKFRPVKRVSPLKHQPETSDNESDNEAQAHNGEGSSKEEASDKTPAACEG
QGFKAKSLGTGGALFGELEHYDLDMDEILDVPYIKSSQHVSTLPRVPHDKRTVGGGGNAS
DRCHGVKASTLTHPESLASVTQYCMLSPVKWSDMRKLKSLDPDNHRPPAGGYDHSTPGSL
SSSSASDMDKLLANRAYPETQAHKTGTDTPGSSQAMMFPLQGCAGSRQDSSKTWNGTRLH
GECDDETKKSQNIINIIREGQISLLPHLAADNLEMIQDEEGNNLLHISASQGHADCLQHL
TSLMGEDCLNERNNHQLTPAGLGVKNGHLECVRWMVSETEAIAELSCSREHPSLIHYAAR
YGQEKVLLWLLQFMQEQAISLDEVDQYGNSAVHVAAQYGHLTCIQTLVEYGSNVTVQNQG
GERPSQSAERQGHTTCARYLVVVETCMSLASQVVKLTKQLNEQATKTNALQNQVQLHLDP
LKAEGTLPRSPSSHVPSVEAWPEMTLTAEGTPGDGHWILRQRSVDSDTVLRQLLGKDISD
KVCTKEKLSLEFQEGSKAGPPSLNGANPGPLRRMGVVERRELKLARLKQIMQRSLSESDS
DTYPPEEAKHGPPPGVRLERPSHLPIAESEEPVGSLHLGMKKHTSTTEHKSAFVLSTSKS
MDGYPSPTSDKSELDADGKPEAGGDFPDYNNGQKITTSPKSALKSPTSRRKTSQNLKLRV
TFDEQVVHKTGPPESEPPKGSHSKEGAGGRTPTGSETVKRPFGTFRSLMESLSGNQNSNN
NNVQSSPSVKQSSCGVSQGSPGRKTEVKTSPCGHSKGKSKASAV
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcctgagtacttggatttggatgagattgacttcactgatgattcagtgtat
tctgtgacatccttgaagaacattccagagctgtccagaagaaacgatggtcagggagaa
gaaagacaagccccagccatcaactggagccgtggtgtgtcgtcacatagtggcggtgga
atcaagccgaccggcatcgccgacgtccacagcaaattccggcctgtgaagagggtctcg
ccactcaaacatcaaccggagacctctgacaacgagagtgacaacgaggctcaggctcac
aatggggaaggcagcagcaaagaagaagcctcagacaaaacacctgcagcctgcgaaggc
cagggatttaaagccaagagcctgggaaccggaggagctctttttggggagctggagcac
tacgacctggacatggatgagatactggacgtgccttacattaaatccagccaacatgtc
tctactcttcccagagttccccatgacaaaaggacggtgggcggcggtggcaacgccagt
gacaggtgccacggcgttaaggcctcaacacttacccaccctgagagccttgcaagtgta
acccagtactgtatgctttcgcccgtcaaatggtccgatatgaggaagttgaaatctctg
gacccggacaatcaccggccacccgctgggggctatgaccactccacaccaggatcactt
agcagttcctctgcctcagacatggataaacttttagccaacagggcctacccagagaca
caggcacacaagacagggactgacacccctgggagcagccaggctatgatgttccccctc
cagggctgtgctgggtctaggcaggacagcagtaagacctggaacggtacaagactgcac
ggagagtgtgatgacgagaccaagaaatcccagaacatcatcaatatcatccgagagggg
cagatctctctgttgcctcacctggccgctgataacctggagatgatccaggacgaggag
gggaacaacctgctccacatctctgcgtcccagggccacgctgactgcctgcagcacctc
acctccctcatgggagaggactgcctcaacgagcgcaacaaccaccagcttacacctgct
gggctcggggtgaagaacggccatttggagtgtgtgcgctggatggtgagtgagacggag
gccatcgctgagctaagctgtagccgagagcaccccagtctcatccactacgcagcccgc
tacggacaggaaaaggttctgctgtggctgctccaattcatgcaagagcaagccatttct
ctggacgaagtggaccagtacggaaacagtgcagtgcatgtagctgctcagtacggccat
ctcacttgcattcagaccctggtggagtacggctccaacgtcaccgtgcagaaccagggc
ggcgagaggccttcccagagcgccgaacggcagggccacaccacctgcgcccgctacctg
gtggtggtggagacgtgcatgtcgctggcctcccaggtggtcaagctcaccaagcagctc
aacgaacaagcaacaaagacgaatgctctacagaatcaagttcagctacacctggatccc
ttaaaagcagagggaactttgccacgatcgcccagctcccatgtcccgtctgtggaggcg
tggcctgagatgaccctgaccgcagaggggacccccggggatggccactggatcctgagg
cagaggagcgtcgactcagacaccgtcctgcgccaactactgggtaaagacatctcagac
aaggtgtgcaccaaggagaagctgtccctggagttccaggagggctccaaagcggggcct
cctagtctgaacggggccaaccctgggcccctgcgcaggatgggggtggtggaaagacgg
gagctgaagctggccagactcaagcagatcatgcagcgctctctcagcgagtccgactcg
gacacctacccccctgaagaggccaaacatggcccccccccaggggtgcgcctagagaga
cccagccacctgcccattgcagaaagcgaggaacctgtcggcagcctgcatctgggcatg
aagaagcacacatcgaccactgagcacaagtcagctttcgtcctcagcacctccaagtcc
atggatggatacccctcgcccacatcggacaaaagcgagcttgacgctgacgggaaaccg
gaggccggtggagatttccccgactacaacaatggacaaaagatcacgacgagccccaaa
agtgcactcaaatcgcctacctctcgaaggaagacctcccagaacctgaaactgagggtg
acctttgatgagcaggtggttcacaagacggggccaccagagagtgagccgcccaagggt
tcccacagtaaagaaggagccggaggtaggactcccacagggtctgagacggtgaagcgc
ccgttcgggacattccgctccctaatggaatcgctgagtggaaatcagaacagcaacaat
aataatgtccaatcgtctccctctgtcaaacagtcaagctgtggtgtgtcccagggctcg
cctggcaggaaaactgaggttaaaaccagtccatgtgggcactccaagggcaagagcaaa
gctagtgctgtttag
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