Oncorhynchus mykiss (rainbow trout): 110526176 Help Entry 110526176         CDS       T07259                                  Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy03420   Nucleotide excision repair omy04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:omy00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     110526176   09124 Replication and repair    03420 Nucleotide excision repair     110526176  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:omy04121]     110526176    03400 DNA repair and recombination proteins [BR:omy03400]     110526176 Ubiquitin system [BR:omy04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      110526176 DNA repair and recombination proteins [BR:omy03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       110526176     TCR (transcription coupled repair) factors      Cul4-CSA complex       110526176 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  110526176 NCBI-ProteinID:  XP_036836361 Ensembl:  ENSOMYG00000013736 UniProt:  A0A8C7VJ39 LinkDB All DBs Position 6:complement(56139928..56166109) Genome browser AA seq 1139 aa AA seqDB search MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK IAVMELFRPKGESKDLLFILTAKYNACILEYKQNGESIDIITRAHGNVQDRIGRPSETGI IGIVDPECRMIGLRLYDGLFKVIPLDRENRELKAFNIRLEELQVIDVHFLYGCQAPTVCF IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGAVVLKDL RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNDSGSYVAVMETFTNLGPIV DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGRE TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNLQTFYCGNVAHQQLIQITSGGVRLVR QDSKALVSEWKEPLGRNISVAACNSSQVVLAVGRALYYLQILSGELKQISTVEMEHEVAC LDITPLGEGGESPLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGGYY LLCALGDGALFYFGLDLTTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIYS SNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESP RRICYQEVSQCFGVLSSRVEMQDASGTTAAVRPSASTQALSSSVSSSKLFPSSTSPHETS FGEEVEVHSLLVVDQHTFEVLHAHQFLQSEYALSMVSCRLGRDPAVYFIVGTAMVYPEEA EPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELRT ECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILD DDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFSHGSLVLQNLGESS TPTQGSVLFGTVNGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTERK TEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH NT seq 3420 nt NT seq  +upstreamnt  +downstreamnt atgtcttataattacgtggtaacagcgcagaaaccgacggcagtcaatgcctgcatcacc ggccactttacttctgcagaggacctgaatctgctcatagccaaaaacacacgcctggag atctatgtggtcacagcggaagggctccggcccgtcaaagaggtgggcatgtacggcaag attgctgtcatggagctcttcaggccgaagggcgaaagcaaggatctgctgttcattctc acggccaaatacaacgcttgcatcctggagtacaaacagaacggggagagcattgacatc atcacccgtgcccatggcaacgtgcaggaccgcatcgggcgtccctcggagacgggcatc attggcattgtagaccctgagtgccgcatgatcggcctgcggctgtacgacggcctattc aaggtgattccgttggaccgggagaaccgagaactcaaggccttcaacatccgcctggag gagctgcaagtcatcgacgtccacttcctgtacggctgtcaggcgcccacagtctgcttc atctatcaggaccctcagggacggcatgtgaagacctatgaggtgtcgctgagggagaag gagttcaacaaggggccgtggaaacaggagaacgtggaggctgaggcttctatggtcatc ccagtcccagaaccatttggaggcgctataatcattggacaagaatccatcacctaccac aacggggataaatacttggccattgcgcctcctaccatcaagcaaagcaccatcgtatgt cacaaccgcgtggaccccaacggctcgcgctacctgctgggggacatggagggccgcctg tttatgctgctgctggagaaggaggagctgatggacggggccgtggtgctcaaggacctc cgtgtcgagctgctcggagagacgtccattgcagagtgcttgacctacctagacaacggt gtggtgtttgttggttccagactgggcgactcccagttggtcaagctcaatgtggacagt aacgactcagggtcgtacgtggcggtgatggagaccttcaccaacctggggcccatcgtg gacatgtgtgtagtggacctggagagacagggacagggccagctggtcacctgttctgga gcgtttaaggagggctccctcaggatcatccggaatggcattgggatccacgaacacgcc agcatcgacctgccagggatcaaaggtttgtggccccttcgctcagaggctgggagagag acagacgatatgctggtcctgtctttcgtgggccagacaagggtgctgatgctaagcggg gaggaggtggaggagactgagttgcctggctttgtggacaacctgcagaccttctactgt ggcaacgttgcccaccagcagctcatccagatcacgtcaggcggtgtgcgtctggtaagg caggacagcaaggccctggtgtctgagtggaaggagccgctgggccggaacatcagcgtg gctgcatgtaactcctcccaggtggtgctggccgtgggccgcgccctctactatctccag atcctctctggggaactcaaacagatcagcacggtggaaatggagcatgaggtggcctgc ctagacatcacgcccctgggggagggtggagagtcgcccctctgcgccgtgggcctgtgg acggacatatcggcacgggtcctcaagctgccctgctttaccgccctgcacaaggagatg ctcggaggagaaattatcccgcgctccatcctgatgacgacgttcgagggcggctactac ctgctgtgtgccctgggagacggagcgctcttctacttcggcctggacctgactacaggc gtgctgagcgagcgtaagaaggtgactttgggcacccagcccacggtgctgaggaccttc cgctccctgtccacctccaacgtgtttgcctgctccgaccggcccaccgtcatctactcc tccaaccacaagctggtcttctccaatgtcaacctcaaggaggtcaactacatgtgtccg ctcaactccgagggctaccccgacagtctggctctggccaacaacagcactctcaccatc gggaccatcgacgagatccagaagctccacattcgcacggttcccctctacgagtctccc aggagaatctgttaccaggaagtgtctcagtgtttcggggtgctgtccagccgcgtggag atgcaggacgccagtgggaccactgcagcggtgcgccccagcgcgagcactcaggctctg tctagcagtgtgagctccagtaagctgttccccagcagcacctccccacacgagacctcc ttcggggaggaggtggaggtgcacagcctcctggtggtcgaccaacacaccttcgaagtg ctccacgcccaccagttcctccagagtgagtacgccctcagcatggtgtcctgccgcctg ggcagggaccccgcggtctactttatcgttggcacagcgatggtctacccagaggaggcg gagcccaagcaaggccgcatcatcgtcttccactacactgacggtaagctgcagacggtt gcagagaaggaggtgaagggagccgtctactccatggtggagttcaatggcaaactactg gccagcatcaacagcacagtgcgtctgtacgagtggaccgccgagaaggagctgaggaca gagtgtaaccactacaacaacatcatggcactctacctaaagaccaaaggagacttcatc ctggtgggagacctgatgaggtctgtactgctgctggcctataaacccatggagggcaac tttgaggagatcgcccgtgacttcaatcccaactggatgagtgctgtggagatcctggac gatgacaacttcctgggggcggagaatgccttcaacctctttgtttgtcaaaaagacagc gcggccactacagacgaggagcgacaacacctacaggaggtgggcgtgttccacctgggg gagtttgtcaacgtcttctcccatgggtcactggtgctgcagaacctgggcgagagctcc acccccacgcagggctctgtcctctttggcactgtcaacggcatgatcggtcttgtgacc tctctgtccgagggctggtatagcctgctgctggacctgcagaaccgactcaacaaggtc atcaagagcgtgggcaagatcgagcacagcttctggaggtccttccatacagagcgtaag actgagcaggccacgggcttcatcgacggggacctcatcgagagcttcctggacctgggc cgtgccaagatgcaggaggtggtcagcacgctacagattgacgacggcagcggcatgaag cgcgaggccaccgtggacgaggtcataaagattgtggaggagctgacaaggatccactag

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