KEGG   Oncorhynchus mykiss (rainbow trout): 110526188
Entry
110526188         CDS       T07259                                 
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03430  Mismatch repair
omy03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110526188 (mlh1)
   03460 Fanconi anemia pathway
    110526188 (mlh1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omy03400]
    110526188 (mlh1)
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     110526188 (mlh1)
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 110526188
NCBI-ProteinID: XP_021462615
Ensembl: ENSOMYG00000022153
LinkDB
Position
1:complement(61403030..61418074)
AA seq 725 aa
MSGVIRRLDETVVNRIAAGEVIQRPANAIKELLENCLDAKSTNIQVTVKEGGLKLIQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLNAISTYGFRGEALASISHVAHVTITTKTADAK
CAYRATYCDGKLKTQPKPCAGNQGTQITAEDLFYNVSTRRKALKSPSEEYSRIVEVVSRY
AIHNSGKSFAVKKQGETMADVRTLPNASILDNIRVVFGNTVSRELIEVGCEDQKLAYKLK
GHISNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNSHPFLYLSLEIAPHNI
DVNVHPTKHEVHFLHEDCIIESVQRQIESKLLGSNSSRTYFTQTLLPGLSVSTSEGKSSS
NSTGDSERVYAHQMVRTDSRAQKLDAFLQPASKLASTPTANPNGQSRGEPVTTNDMEEMD
NAEILEEQAPGATEDGEGTSRNTPADLPRKRPRAGQDKEQEDLTAAATTRRRAIKLSSVK
ELRDDIAEHAHKGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNTTKLSQELFYQILIYD
FGNFGILRLSEPAPLYDLAMLALDSEESGWSEEDGPKEGLAQYIVDFLKKKSEMLEDYFS
MEIDQEGNLTGLPLLLDKYTPPMEGLPMFILRLATEVNWDNEKDCFRDFSKECSQFYSIR
KQYVLELEPGEEEQDAELNSWRWKVEHLLFKSFRSLFSPPKHFSEDGSVLQIANLPDLYK
VFERC
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgtccggggtgattcggagactcgatgagaccgttgttaatcggattgctgctggagaa
gttatccaacgtcctgcaaatgctatcaaagaattgcttgaaaactgtttagatgccaag
tccaccaacatacaggtgactgtgaaggaggggggtctgaaacttatccagatacaagac
aatggcactggcatcaggaaagaagatatggaaatagtatgtgaacggtttacaacaagc
aagctccagacttttgaggacctcaacgccatctcaacctatggtttccgaggagaggca
cttgccagtataagccatgttgcccatgtgaccataacaaccaaaacggctgacgccaag
tgtgcttacagagccacctactgcgatgggaaactaaagacccaacccaaaccctgcgct
ggaaaccaggggacacagatcactgcggaggatctgttttataacgtgtccaccaggagg
aaagcactgaagagccccagtgaggagtactccaggattgtggaggtggtgagcaggtat
gccatacacaactctgggaaaagctttgctgtcaaaaagcaaggcgagaccatggcagac
gtcaggaccctacccaacgcctccatactggataatatccgtgtggtgttcggcaataca
gtcagcagggagctgattgaagtgggctgtgaggatcagaagcttgcctataagctgaag
ggccacatctccaacgccaactactcagtgaagaagtgcatcctcatcctcttcatcaat
catcgtctggttgaatcgagtgccttaaaaaaagccattgagaccgtttatgctgcatac
cttcccaagaactctcacccatttctatatctcagcctggagattgcccctcataacatc
gacgtgaatgtccaccctaccaaacacgaggtgcacttcctccacgaagactgtatcatc
gagagcgttcaaagacagatagagagcaaactcctgggctccaactcctcacgcacgtac
ttcacacagactttgctgcctgggctgtctgtctccaccagcgaggggaagtcttcctcc
aactccacaggggacagtgagcgggtctacgcccatcagatggtcaggaccgacagtaga
gcccaaaagctggacgcctttctccagccggcgtccaagctggcctctactcccaccgcc
aaccctaatgggcagagcaggggggaacctgtgaccaccaatgacatggaagagatggac
aacgcagagatcctggaggaacaggcgccaggtgccacagaggatggggagggaaccagc
cgaaataccccagctgatctccccaggaagcgtccccgtgccggtcaggacaaggagcag
gaggacctgactgctgcagccacaaccaggagacgagccatcaagctgagcagtgtgaag
gagctgagagatgacatcgctgagcacgcacacaaaggtcttcaagagatgcttcagaat
cactcgtttgtgggctgtgtcaacccccagtggactctgatccagcaccataccaaactg
taccttctcaacaccaccaaactcagccaggagctattctaccaaattttgatctacgac
ttcggtaactttggcatcttgaggttatctgagcctgcgccactctatgacctggccatg
ctggctctggactccgaggagagcggctggtcggaggaggacgggcccaaggagggtctg
gcccaatacatagttgacttcttgaagaagaaatctgagatgctggaggactacttctcc
atggagatcgaccaggaaggaaatctcaccggtttgccattgctgcttgacaagtacacc
cctcctatggagggtctgcccatgttcatcctacgtttggctactgaggtgaactgggac
aatgagaaggactgcttcagagacttcagcaaggagtgcagccagttctactctatcagg
aaacagtatgtcctggagctggagccgggagaggaggagcaggatgcagagctgaactcg
tggcgttggaaggtggagcatctcctgtttaaatccttccggagcctcttcagtccccct
aaacacttcagtgaggatggcagcgtactccagattgctaatctaccagacctctacaaa
gtatttgagcgatgctaa

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