Oncorhynchus mykiss (rainbow trout): 110526220
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Entry
110526220 CDS
T07259
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110526220 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110526220 (herc4)
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110526220 (herc4)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
HECT type E3
110526220 (herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Glyco_hydro_129
Motif
Other DBs
NCBI-GeneID:
110526220
NCBI-ProteinID:
XP_021462683
Ensembl:
ENSOMYG00000022507
UniProt:
A0A8C7RGB6
LinkDB
All DBs
Position
1:61517953..61540937
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AA seq
1050 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVVEPRKCDFFHGKQVCDIGCGRRHTTFLLGDGTVYTCGC
NDIGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVFAWGLATDGQLGLAN
FEECVRVPRNIKSLSDVEIAQVACGYRHSHALSRGGQVYSWGQNRYGQLGLGVAGQGIST
PQVIQSLQGIPFIQISAGGAHSFALTFSGAVFGWGRNKFGQLGLNDNNDRYYPAQLKSLR
SQRVIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNTTNHEINPRKVFELMGNVVTQIS
CGRQHTLAFIPSSGKMDSFGLGGNGQLGTRSTSNRNSPAPVKGPWVAYNGPTPTIADMEQ
GCCVKRIYAGGDQSFAHCYTPQNPLVPDDIRIPDPRRHICTLSADLTQRWLNHYTHGRLP
QEISNEIDLVFSSASCLNGSFLAGSHPDHYNTSSKCSGVDMNMARLLFHRVVQHDYPEIA
QQIAASLEKNLIPRLSSSPPDIEALRLYLTLPECPLFSDPNTYVTLAIPFAKAFISLKEA
PLKVLGNWWSQFEAPVFQRLVELYKVVVVYLLKMHKVGVPHSEQRVFTCFLDTALKLLEI
LHAVNERAGHIIQYDKFYIHELDDLIDIRNDYITWIQQQMYSMAHDSAVTLCKYPFVFDA
QAKTTLLQTDAVIQMQMAVDQAQRQNFSSMFLPVVESVNPCLILIVRRENIVGDTMEVLR
KSKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEESRLIWFANK
TFEDIDLFHLIGVICGLAIYNLTIVDLHFPVALYKKLLKRNPTLDDLKELMPDVGRSLQQ
LLDYTEDDVEDTFCLNFTVTVENFGATEVLELVPNGMDICVDNSNRPEFVSAYVDYIFNK
SVAALFESFFAGFHKVCGGKVLELFQPNELQAMVIGNTNYDWKELEKSTEYKGEYWAENP
TIKFFWEVFHDLSLEKKKLFLLFLTGSDRIPILGMKSLKLVIQPTGGGEHYLPVAHTCFN
LLDLPKYSSRETLQNKLLQAIDHNQGFNLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttggggaaatgcttccttcggtcagctaggtttgggcgggatcgatgaggag
attgtggtggagccccggaaatgtgatttctttcatgggaagcaggtgtgtgatatcgga
tgtggccgacggcacaccacatttctactgggagacgggactgtgtacacctgtggctgc
aatgacattgggcagctggggcacgagaagtctcgaaagaaaccagagcaggttgtggca
ctagatgcacagaacattgtggcagtgtcatgtggggaggcccatactctcgcactgaat
gacaaaggacaagtgtttgcatggggcttggccacagatggacagctgggccttgcaaac
ttcgaagaatgtgtacgtgtgcccagaaacatcaagagtttatcagatgtagaaattgct
caggtagcctgtggatatcggcactcccatgctctgtctagaggaggccaagtctattca
tggggacaaaaccgatacggacaactagggctgggagtagctggacaaggcatctctact
ccccaagtcatccagtctttacaggggattcccttcatccagatctcagcagggggtgct
cacagctttgccctcacattctcaggggccgtctttggctgggggcgcaacaagtttggg
caactcggcctcaatgacaacaatgatcggtattatccagcccagctcaagtccctcagg
tcacagagggttatctacatctgctgtggggaggaccacactgccgcacttacaaaggaa
ggaggtgtgtttacatttggagcaggagggtatggccagcttggacataacactacaaac
catgagatcaaccccaggaaggtgtttgagctcatgggaaatgtagtcacacagatatcc
tgtggaagacagcacactctggccttcatcccctcctctggaaagatggattcatttggg
ctgggagggaacgggcagctcggtacacgctccacatccaacaggaacagccctgcccca
gtcaaaggcccctgggtggcctacaatggcccgacgcccacaatcgcagacatggagcag
ggctgctgtgttaagaggatctatgctggaggggaccagagctttgcccactgttacact
ccccagaaccctctggtgcctgacgacatcagaataccagatcccagaagacacatatgc
accttatctgctgatctcactcagagatggctgaaccattatacacacggaagactccca
caagagatttccaacgagatcgatcttgtgttttcctctgcaagttgcctcaatggaagc
tttctggctggcagccatccagatcactacaacacgagcagtaaatgctcaggggtggac
atgaacatggctcgcctcttgtttcacagagtcgttcaacatgactatccagaaattgca
cagcagattgcagccagtctggaaaagaacctgattcccagactaagcagctcccctcca
gacatcgaggccctgagactctacctcaccctgccagagtgtcctctcttcagcgaccca
aacacatacgtgactctggccatcccttttgccaaggcattcatcagtctgaaagaggct
ccactgaaggtgcttggcaactggtggtctcaattcgaagccccagtcttccagaggctt
gtggagctgtataaggtggtggtggtttacctgctgaagatgcacaaggtgggagtcccc
cactcagagcagagggtcttcacctgcttcctggacacggcactcaagcttctggagatc
ctgcacgctgtgaacgaaagagccggacatatcatacagtacgacaaattctacattcac
gagttggatgacctgatagacatccgaaacgactacatcacatggattcaacagcagatg
tactctatggctcatgacagtgcggtcaccctctgtaagtaccccttcgtgtttgatgcc
caggcaaagaccaccctgcttcaaactgatgctgttattcaaatgcagatggcagtggac
caggcacagcggcagaacttcagctccatgttccttccggtggtggagtctgttaacccc
tgcctcatcctcattgtgaggagggagaacatcgtcggggacaccatggaggtcctcagg
aagtccaagaacgtcgactacaagaaacctctgaaggtgatctttgttggagaagaggcg
gtcgatgcagggggtgtgcggaaggagttcttccttctcatcatgagagagctcctggac
cccaaatacggcatgttccgatactacgaggagtccaggctgatctggtttgcaaacaag
acgtttgaggacattgacctgttccacctcatcggggtcatctgtgggctggccatctac
aacctcaccatcgtggacctccacttcccagtggccctgtacaagaagctgctgaagagg
aaccccacgttggatgatcttaaggagctgatgcctgatgtggggaggagtctgcagcag
ttactagactacacagaggatgatgttgaagacacattctgcttgaacttcaccgttaca
gtggaaaactttggcgccacagaggtcttagaactggttccaaatggcatggatatctgt
gttgacaactcaaacaggcctgagtttgtctctgcatacgtggactacatcttcaataaa
tcagtggctgcgcttttcgagtcctttttcgcaggcttccacaaagtgtgtggtggcaaa
gtcctggagctgttccagcccaacgaactgcaggccatggtcattggcaacaccaactac
gattggaaagagcttgaaaagagcactgagtataaaggagagtattgggctgaaaatcca
accattaagttcttctgggaggtgttccatgatctctctttggagaagaagaagctcttt
ctcttgtttctcacaggaagtgaccgcattcccatcctgggcatgaaaagcctgaagctg
gtgatccaacccacgggaggcggagaacactacctgcccgttgcacacacctgcttcaac
ctattggacctgcccaaatacagcagccgggagacgctccaaaacaagcttctccaagcc
atagatcacaatcaaggtttcaacctggcctaa
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