Oncorhynchus mykiss (rainbow trout): 110526263
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Entry
110526263 CDS
T07259
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110526263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110526263
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
110526263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
110526263
NCBI-ProteinID:
XP_021462746
Ensembl:
ENSOMYG00000003039
LinkDB
All DBs
Position
6:complement(60432826..60448496)
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQLEGEDAMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKY
KQIVLSGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNLFLRSCADLHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTIISQEQVDAILSLVSTLIQDQPDQPAED
PDPEDFAEEQSLVGRFIHLLLSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKENSSSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERTKCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRNTEKNGEEILDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPEAEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacacagcagtcaccccaggacgagcaggaaaagctacttgatgaagctgtg
caggctgtcaaggtccagtcatttcagatgaagcgttgcctggacaagaacaagctgatg
gatgcattgaaacatgcatctaacatgctgggtgaactcaggacctccatgttatcgcca
aagagctactacgaactctacatggccatctctgacgagctccactacctggaggtgtac
ctgacagatgagtttgccaaaggcaggaaggtggctgacctctatgagctggttcaatat
gcagggaacatcatccccagactttacctgctgatcactgtgggggtggtgtatgttcgc
tccttccctcagtcgcgcaaggacatcctgaaggacctggtggagatgtgtcgtggggtg
cagcacccgctgagaggcctgttcctcagaaactacctgctccagtgcacccgcaacatc
ttgcctgacgacggggagcagttagagggggaggatgcgatgacgggagacattaacgac
tccattgactttgtgttgctgaattttgctgagatgaataagctgtgggtgcgcatgcag
caccagggccacagccgagacagggagaagagggagaaggagaggcaagagctgcgcatc
ctggtcgggaccaacctggttcgactcagccagctggagggggtcaacgtggaaaagtat
aaacagattgtgctgtccggtgtcctagaacaggtggtaaactgcagagattccctggct
caagaatatctcatggagtgcatcattcaggttttccctgatgagttccaccttcagaca
ctgaacctattccttcgttcctgtgccgacctgcatcagcacgtcaatgtcaaaaacatc
atcatcgctctcattgacagactggctttgtttgctcaccgagaagatggacctggaatc
cctgctgaaatcaaactgtttgatattttctcccaacaagtagccacagttatacagtcc
cgccaggacatgccttcggaggatgtggtctcactacaggtgtccctcatcaacctggca
atgaagtgctaccctgaccgggtggactatgtggacaaggtgttggagagcacagtggag
atcttcaataagctcaacctggagcacattgcaaccagtagcgcggtctcgaaagagttg
actaggctgctgaagatcccagtggacacctacaacaacattctgaccgttctgcaactc
aagcacttcccaccactcttcgagtactttgattatgagtcccgcaaaagcatgagctgt
tacgttctgagcaacactctggactacaacaccaccattatatcccaggagcaggtggat
gccatcctgtccctggtgtcaacactgatccaggaccagccagaccagcctgctgaggac
ccagacccagaggactttgctgaggagcagagccttgtgggtcgcttcattcatctgctg
ctttccgatgaccccgaccaacagtatctgatcctgaatacagccaggaagcactttggt
gctggggggaaccagaggattcgctacactcttccaccgctggtgtttgctgcctatcag
ctggccttccgctacaaagagaactcttcatcagatgataaatgggagaagaagtgccag
aagatcttctcgtttgcccaccaaaccatcagtgccttgatcaaggctgagctggctgag
ctgcccctcagactcttcctacagggggcgctggccgcaggagagattggctttgagaac
cacgagactgtggcctacgagtttatgtcacaggccttctccctgtatgaggatgagatc
agcgactccaaggctcaactagcagctatcacgctgatcatcggcacgtttgagagaaca
aaatgcttcagcgaggagaaccatgagcccctgaggacacagtgtgcgctcgctgcctcc
aaactgctcaagaagccagaccagtgtcgggccgtcagcatctgtgcacacctcttctgg
tccggacgcaacactgaaaagaatggagaggagattcttgacgggaagagggtgatggag
tgcttaaagaaggccctgaaaatcgccaatcagtgcatggacccgtcattgcaagtgcag
ctcttcattgagatcctgaacagatatgtctgtttctacgaaagagagaatgatgcggtg
acggtccaggttctgaaccagctgatccagaagatccgagaggacctgccaaacctggag
gccagcgaggagacggagcagatcaacaaacacttccacaacacactggagcacctgcgt
ctgcagagagagtcgccggaggctgaggggcctgcttatgagggcctggtgctgtag
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