Oncorhynchus mykiss (rainbow trout): 110526277
Help
Entry
110526277 CDS
T07259
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
omy04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110526277
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110526277
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110526277
04090 CD molecules [BR:
omy04090
]
110526277
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110526277
CD molecules [BR:
omy04090
]
Proteins
110526277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
110526277
NCBI-ProteinID:
XP_036836525
Ensembl:
ENSOMYG00000014862
LinkDB
All DBs
Position
6:61885833..61902001
Genome browser
AA seq
766 aa
AA seq
DB search
MMRQSAWRQMTAPELWMGLFALALTLSLTMAEHMDQRPALQTSPVLHRHKREWLWNNLYV
EEERPTYFQYYLGKLKSTKSGDRTHYVIEGEGANTIFKVDEKGDIFVTERLDREVKSKYH
LSAKLVDTSNKLVEKVEDFVILVTDINDNDPVFTKSFNASIKERSKRGTKVIEVTATDAD
DPTTANGELDYKLLEGGDFFNIDSTTGIITTKYENLDRETQSSYVVVVQAQDLRGLKQGG
TATTSVSIAVSDINDNIATFTKSSYVFRVKEDMKRGQRIDTMVLEDRDEIQNKDPIFTIA
PSSDIFEMERSQIKDGNLMLKKGLDYETKSSYTFFVHVRENHLQSPADNKDNPLIKAQVT
IQVLDVDEQPEFSKSIYNFNVIEEMMVNNIGVISARDPDQAKKAIRYSIEDKDSPIGINP
ITGQLFTVRKLDRELVANHMFQVKAKEEPNGLESFVNVNILVIDINDNKPELSIEEIFVC
ENDMAGTVIGTISATDKDDHLPAFSFTLVKPNGNFSVIDNNDNTSNIVLKHGGFSLEDSR
DYVIEIGISDGGRPPMNSITSLPIKVCRCDNKRIHTQCKAAQLKMGVSVHALIVILVCIL
TILVVVILIAMRKRHQKDALVTLGKSEIHEQLVTYDEEGGGEMDTNGYDVSILTSARNDG
SMSMRQGPSLYAMVKKPPTACKGDMAVMIEVKKDEADHDRDEIPYDTLHIYGYEGPESLA
GSLSSLDSSSTGSNLDYDFLNDWGPRFRTLAELYGVDGSEGSGSPY
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgatgagacagtctgcatggaggcagatgacggcaccagagctgtggatgggtctcttt
gccttggccctgaccctcagtctaaccatggctgaacatatggatcagaggccagcactc
caaaccagcccagttctccacaggcacaagagagagtggttgtggaacaacctttacgtg
gaggaggaaaggccaacctacttccaatactatcttggaaagttaaagtcaacaaagtct
ggtgacaggacacactatgtcattgagggagaaggtgccaacacaatcttcaaagtggat
gaaaaaggagacatctttgtcactgaacgattggatcgagaggtgaaaagcaaataccat
ctaagtgcaaagctggttgataccagcaacaaattggtggagaaagtggaagactttgtg
atcctggttactgacatcaatgacaatgatccagtgtttactaaatcgttcaacgcttct
atcaaagagagatccaaaagaggaactaaagtgatagaagtcacagccactgatgcagat
gatccaacgactgcaaatggagaacttgattacaaattattagaggggggagatttcttc
aatatagacagcacaacagggattatcaccaccaaatatgagaacctggaccgtgagacc
cagagtagctatgtggttgtggttcaagcccaggatctgagaggacttaaacaagggggc
accgccaccacctctgtcagcatcgcagtcagcgacatcaatgataacatagccacattt
accaaaagttcctatgtatttagagtgaaagaggacatgaagcggggacagagaatagac
accatggtcctggaggacagagatgagatccagaataaagaccccatcttcaccatagca
ccttcatctgacatttttgaaatggagcgcagtcagatcaaagacggcaacctcatgctg
aaaaagggactggattatgaaaccaagagcagctacacattctttgtgcatgtgagggag
aaccacttgcagtcccctgcggataataaggacaatcctttgatcaaggcccaggtgacc
atccaggtgctagatgttgatgagcagccagaattcagcaagagcatctacaactttaat
gtcattgaggaaatgatggtcaataatattggagtcatttcagccagagatcctgatcaa
gccaaaaaggccatacggtattccattgaggacaaggacagtcccattggtatcaacccc
ataactggacaacttttcacagtgaggaagctggatcgggagttagtagccaatcacatg
ttccaggttaaagctaaggaggaaccaaatggactggaatcttttgtgaacgtcaacata
ctggtcattgatatcaatgacaacaaaccagagctgtccattgaggagatattcgtttgt
gaaaatgatatggctggaacggtgattgggaccataagtgccacagacaaagatgatcat
ttgcccgcattcagcttcacgttggtgaagccgaacggcaacttttcagtcatcgataac
aacgacaacacatctaacatagtgctgaaacatggaggcttcagcctggaggactccagg
gattatgtaatagaaattgggatcagcgatggaggcaggcctcccatgaacagcatcacc
tctctgcctatcaaagtgtgcaggtgtgacaacaagaggatccacacccagtgcaaagca
gcccaactcaaaatgggtgtcagtgtccacgcccttattgttatactggtgtgcatcctg
actattctggtcgtagtgatcctgatcgctatgagaaaacgtcaccagaaggatgccctg
gtcactctgggtaagagtgagatccacgagcagctagtgacgtacgacgaggagggcggt
ggggagatggacaccaatggctatgacgtgtccatcctgacctcagctcggaatgacggc
agcatgagcatgaggcagggccccagcctttacgccatggtgaagaaaccgccaaccgcg
tgcaagggagacatggccgtgatgatcgaggtgaagaaagacgaggctgaccatgacagg
gatgagatcccctacgataccctgcacatctatggctacgaggggccagagtccctggct
ggtagcctcagttccctggatagttcctctactggctctaaccttgactatgacttctta
aacgactggggccctcgcttcagaaccctggctgagctctacggggtggatgggtctgag
ggaagtggctcaccatattga
DBGET
integrated database retrieval system