KEGG   Oncorhynchus mykiss (rainbow trout): 110526277
Entry
110526277         CDS       T07259                                 
Name
(RefSeq) cadherin-5
  KO
K06533  cadherin 5, type 2, VE-cadherin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514  Cell adhesion molecules
omy04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    110526277
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    110526277
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110526277
   04090 CD molecules [BR:omy04090]
    110526277
Cell adhesion molecules [BR:omy04515]
 Cadherins
  Major cadherins
   110526277
CD molecules [BR:omy04090]
 Proteins
  110526277
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_CELSR2_9th Cadherin_2
Other DBs
NCBI-GeneID: 110526277
NCBI-ProteinID: XP_036836525
Ensembl: ENSOMYG00000014862
LinkDB
Position
6:61885833..61902001
AA seq 766 aa
MMRQSAWRQMTAPELWMGLFALALTLSLTMAEHMDQRPALQTSPVLHRHKREWLWNNLYV
EEERPTYFQYYLGKLKSTKSGDRTHYVIEGEGANTIFKVDEKGDIFVTERLDREVKSKYH
LSAKLVDTSNKLVEKVEDFVILVTDINDNDPVFTKSFNASIKERSKRGTKVIEVTATDAD
DPTTANGELDYKLLEGGDFFNIDSTTGIITTKYENLDRETQSSYVVVVQAQDLRGLKQGG
TATTSVSIAVSDINDNIATFTKSSYVFRVKEDMKRGQRIDTMVLEDRDEIQNKDPIFTIA
PSSDIFEMERSQIKDGNLMLKKGLDYETKSSYTFFVHVRENHLQSPADNKDNPLIKAQVT
IQVLDVDEQPEFSKSIYNFNVIEEMMVNNIGVISARDPDQAKKAIRYSIEDKDSPIGINP
ITGQLFTVRKLDRELVANHMFQVKAKEEPNGLESFVNVNILVIDINDNKPELSIEEIFVC
ENDMAGTVIGTISATDKDDHLPAFSFTLVKPNGNFSVIDNNDNTSNIVLKHGGFSLEDSR
DYVIEIGISDGGRPPMNSITSLPIKVCRCDNKRIHTQCKAAQLKMGVSVHALIVILVCIL
TILVVVILIAMRKRHQKDALVTLGKSEIHEQLVTYDEEGGGEMDTNGYDVSILTSARNDG
SMSMRQGPSLYAMVKKPPTACKGDMAVMIEVKKDEADHDRDEIPYDTLHIYGYEGPESLA
GSLSSLDSSSTGSNLDYDFLNDWGPRFRTLAELYGVDGSEGSGSPY
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgatgagacagtctgcatggaggcagatgacggcaccagagctgtggatgggtctcttt
gccttggccctgaccctcagtctaaccatggctgaacatatggatcagaggccagcactc
caaaccagcccagttctccacaggcacaagagagagtggttgtggaacaacctttacgtg
gaggaggaaaggccaacctacttccaatactatcttggaaagttaaagtcaacaaagtct
ggtgacaggacacactatgtcattgagggagaaggtgccaacacaatcttcaaagtggat
gaaaaaggagacatctttgtcactgaacgattggatcgagaggtgaaaagcaaataccat
ctaagtgcaaagctggttgataccagcaacaaattggtggagaaagtggaagactttgtg
atcctggttactgacatcaatgacaatgatccagtgtttactaaatcgttcaacgcttct
atcaaagagagatccaaaagaggaactaaagtgatagaagtcacagccactgatgcagat
gatccaacgactgcaaatggagaacttgattacaaattattagaggggggagatttcttc
aatatagacagcacaacagggattatcaccaccaaatatgagaacctggaccgtgagacc
cagagtagctatgtggttgtggttcaagcccaggatctgagaggacttaaacaagggggc
accgccaccacctctgtcagcatcgcagtcagcgacatcaatgataacatagccacattt
accaaaagttcctatgtatttagagtgaaagaggacatgaagcggggacagagaatagac
accatggtcctggaggacagagatgagatccagaataaagaccccatcttcaccatagca
ccttcatctgacatttttgaaatggagcgcagtcagatcaaagacggcaacctcatgctg
aaaaagggactggattatgaaaccaagagcagctacacattctttgtgcatgtgagggag
aaccacttgcagtcccctgcggataataaggacaatcctttgatcaaggcccaggtgacc
atccaggtgctagatgttgatgagcagccagaattcagcaagagcatctacaactttaat
gtcattgaggaaatgatggtcaataatattggagtcatttcagccagagatcctgatcaa
gccaaaaaggccatacggtattccattgaggacaaggacagtcccattggtatcaacccc
ataactggacaacttttcacagtgaggaagctggatcgggagttagtagccaatcacatg
ttccaggttaaagctaaggaggaaccaaatggactggaatcttttgtgaacgtcaacata
ctggtcattgatatcaatgacaacaaaccagagctgtccattgaggagatattcgtttgt
gaaaatgatatggctggaacggtgattgggaccataagtgccacagacaaagatgatcat
ttgcccgcattcagcttcacgttggtgaagccgaacggcaacttttcagtcatcgataac
aacgacaacacatctaacatagtgctgaaacatggaggcttcagcctggaggactccagg
gattatgtaatagaaattgggatcagcgatggaggcaggcctcccatgaacagcatcacc
tctctgcctatcaaagtgtgcaggtgtgacaacaagaggatccacacccagtgcaaagca
gcccaactcaaaatgggtgtcagtgtccacgcccttattgttatactggtgtgcatcctg
actattctggtcgtagtgatcctgatcgctatgagaaaacgtcaccagaaggatgccctg
gtcactctgggtaagagtgagatccacgagcagctagtgacgtacgacgaggagggcggt
ggggagatggacaccaatggctatgacgtgtccatcctgacctcagctcggaatgacggc
agcatgagcatgaggcagggccccagcctttacgccatggtgaagaaaccgccaaccgcg
tgcaagggagacatggccgtgatgatcgaggtgaagaaagacgaggctgaccatgacagg
gatgagatcccctacgataccctgcacatctatggctacgaggggccagagtccctggct
ggtagcctcagttccctggatagttcctctactggctctaaccttgactatgacttctta
aacgactggggccctcgcttcagaaccctggctgagctctacggggtggatgggtctgag
ggaagtggctcaccatattga

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