Oncorhynchus mykiss (rainbow trout): 110526287
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Entry
110526287 CDS
T07259
Name
(RefSeq) cadherin-16
KO
K06810
cadherin 16, KSP-cadherin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110526287
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110526287
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Big_9
Protocadherin
Motif
Other DBs
NCBI-GeneID:
110526287
NCBI-ProteinID:
XP_036836531
UniProt:
A0A8C7Q6R8
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All DBs
Position
6:complement(62111228..62149523)
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AA seq
817 aa
AA seq
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MSIFIITLTLVVLQTPAQCSGANLKIGVPENYDGIFPWYLAKLPNLPATSTDVVVTGDDE
GIFGVEAGFLYALKPLDREKQPSYSLQVSFSASVQSQSFMVEVCVIDKNDNVPVFIEESM
RGSVQLGLLKGISFMQVGASDRDDRNTAHADLRFSLMDQTPRIPSSHMFFIDSVTGEVSL
TEDGASTLDPEMCGRYKLSVMVKDMGGKPNAFFSTGIVTVEVTGNTWASPDPVRLQENLP
GPYPIPISQVKWSGGLVEYSLEGEFPEMLFTVSREGVISLNAPLDRETQDQFQISIVVER
PDGREIAKPVELRVMVGDANDNRPTFPTTQYHTVVKELAPRGTEILTVQAADNDDPKTDN
VRIFYRLVGQIPESPRALFRVDRDSGVISVQADNLEGAAPQYTLTITAEDAKGLNSSCTV
VVTVQDENNNPPVFTPHEYGPFHLAEDAPLGATVTAVSAWDADERGGDSWQVNYRLESGN
EEEVFMLVTDKQTNEVSLILSKVLDFERESEYILVLSAQNPVALVRGRYGPASTATVSIY
VDDINEGPILSQSHYEVTVREGEEPGRVIATIRGYDPDSHPIRYSLRGDTKRYFSIGKYS
GELKTVQALDREENSTYTMEVMAEDGRNSSLSASTLVTVHILDVNDNSPVLVGDYSWKYL
CTPRWEDQALVLASRDSDGPQHGGRLNFSLRSDATVRGNWKLTPINDTHTNLSLNIPYLS
PEVYTVPFTISDSSSPPRSTFINLPVTVCPCNVRGNCRTAAKQLQGMPTVQSTVGILLGT
LGVIGIILIVVFVRLSYQNPKPPSKTNQEREPLRISL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctttatcattacactgactttggtggtacttcagactcctgcacagtgctca
ggggccaatcttaaaattggcgtccctgaaaactatgatggtattttcccatggtacctg
gctaagctccctaacctcccagctacctccactgacgtggtggtgacaggggacgatgag
gggatctttggagttgaggcaggatttctttacgccttgaagcctctggacagagagaag
cagccatcttactctctgcaggtgtccttctcagcatccgtgcagtctcagagctttatg
gtggaggtatgcgtcattgacaaaaacgacaacgtgcctgtgtttatcgaggagagcatg
agaggcagtgtgcagctgggacttctgaaagggatctcattcatgcaggtgggggcatct
gaccgtgacgaccgtaacacagcccatgctgacctgcgcttcagcctgatggaccagacc
cccaggatcccctccagtcacatgttcttcatagactctgtgaccggcgaggtgtctctc
actgaggacggggcttccaccctggacccagagatgtgtggtcgctacaagctgtcagtg
atggtgaaggacatgggggggaaacccaacgctttcttctccacgggcatcgtgacagtg
gaggtgacggggaacacctgggcgtcaccggaccctgttcgcctccaggagaacctccct
ggcccctaccccatccctatctcacaggtgaagtggagtggaggtctggtagagtatagc
ctggagggggaattcccagagatgctgttcactgtcagcagagagggagtcatctctctc
aacgccccactagacagagagactcaggaccagttccagatcagcatcgtggtggagcgt
ccggatggcagggagatcgccaagcctgtggagctgagggtgatggtgggcgatgccaac
gacaacaggcccacgttccctaccacacagtaccacaccgtggtcaaggagctcgcccca
cgggggacggaaatcctcacagttcaagcagccgacaacgatgatccgaaaacagataac
gtgaggatcttctaccggctggttggccagatcccagagagccctcgtgccttgttccgg
gtggaccgtgactcgggggtcatctcagtgcaggcagacaacctggagggagccgcccca
cagtacacactgaccatcactgccgaggacgctaaaggcctaaacagctcctgtactgtg
gttgtgacagtgcaggacgaaaacaacaacccacccgtcttcactccacacgagtatggc
cccttccacctggcagaggatgctcctttgggagccacggtaacggctgtgtcagcatgg
gatgctgatgagaggggaggagacagctggcaggtgaattacaggctggagtctggcaac
gaggaggaggtgttcatgctggtcacagacaagcagaccaatgaagtttccctcatcctc
tccaaggtgctggactttgagcgggagagcgagtacatcctggtccttagtgctcaaaac
ccagtggccctggtacgagggaggtatggcccagcgtccacggcaaccgtctccatctat
gtggatgatatcaacgagggccccatcctgtcccagagccactacgaggtcaccgtcaga
gagggggaggagccaggacgggttattgccactattcgtggatatgacccagactcacac
ccaatcagatactcgctcagaggagacacaaagaggtatttctccattgggaagtactca
ggtgagctgaagactgtccaggccttggacagagaagaaaacagcacctacaccatggag
gtcatggctgaagatggacggaactcttctctgtcagcttcaacactggtcacagtccat
atcctggatgtgaatgacaacagtccggtgttggtgggagactactcctggaagtaccta
tgtaccccacgctgggaggaccaggccttggtgctggcatcccgggacagtgatggtccc
cagcacggtggcaggctcaacttctccctccgcagtgacgccactgtgcgcggcaactgg
aaactcacccccatcaatgacacccataccaacctgtccctgaacatcccatacctgtct
cctgaggtctacacggtccccttcaccatctctgacagcagctctcctcccaggagcacc
ttcatcaacctgccagtgacggtgtgcccatgcaatgtgagaggaaactgcaggaccgcc
gctaagcagctgcaaggcatgccaaccgtccagtccaccgtcggcatcctactgggaacc
ttgggggtcataggaatcattctaatcgttgtgtttgtgaggctgtcctaccagaacccc
aaacctccgagcaaaaccaaccaggagagagaacccctgaggatctcactgtga
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