Oncorhynchus mykiss (rainbow trout): 110526291
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Entry
110526291 CDS
T07259
Name
(RefSeq) B-cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04371
Apelin signaling pathway
omy04514
Cell adhesion molecules
omy04520
Adherens junction
omy05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
110526291
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110526291
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110526291
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110526291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110526291
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110526291
04090 CD molecules [BR:
omy04090
]
110526291
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
110526291
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110526291
CD molecules [BR:
omy04090
]
Proteins
110526291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
DUF1366
Motif
Other DBs
NCBI-GeneID:
110526291
NCBI-ProteinID:
XP_021462792
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Position
6:62328353..62346632
Genome browser
AA seq
881 aa
AA seq
DB search
MGAFWFVELGVLILFLQAFKPGSSESKCLPGFNPEIYLFKVERYHLQSGRRLGKVVFDDC
TSRTSFLFHSEDSRFKVDGDGTLKLKRGLTLHNGHKEFYVSTHSKGKKFTVPVRVLHEAR
HGHHHNHHEMTTQPKPEKSLSLPVLNFPKSSGGLKRRKRDWVIPPINFPENARGPFPKNM
VQIKSSNDKEVKIQYSITGTGADLPPVGLFTVDKNSGILYVTQPLDRERKDQYILLAHAV
AVGAGIAEDPMEIIVKVIDMNDNKPVFTQDPFTGTVPEASKPGDEVMQVTATDADEEGSA
NSDVRYTILSQEPPLPSPNMFVINPVTGGIRVNAPGLDREKYTKYTLAIQAADMEGNGLT
SFGKAIITVTDSNDNAPQFVTPSYTVSVPENKVDALVVKMPVTDGDEPHSSAWATTYKIV
DGDPQGLFSVSTGPSKLEGIITTAKPLDFEKNNKYTLLVTVQNEVPFAISLPTSTATVVV
NVEDVNEAPVFTPVEKIIRKPEDLPVDSDLVLYTATDPDTARNQKVTYKIRNDPAGWLNI
NKDTGLIKVKSLMDRESTFVQDNKYSVVVLGIDNDEIPATGTGTLIIELEDVNDNAPTID
ESVIRVCNKESSPQLLSVTDKDSAGFAAPYTVQLQGSSHSNWTARMNDTKTGIILTLKTV
LDSGDYMVVLRVSDNQGLHHDSTIQASVCDCKGADVQCTDKAVAGFGISSILGILGAVLL
LLLLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHRGLDNR
PDVFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGS
EAGSLSSLNSSNSGGDQDYDLLQEWGPRFKKLSDMYGGGED
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggggcattttggttcgtggagttgggcgtattaatattatttctccaggctttcaaa
ccagggtcgtcggagtcaaaatgtctaccaggtttcaatccagaaatataccttttcaaa
gtggaaagatatcacttacaaagtggccggagactaggaaaagtggtttttgatgactgc
accagccgtaccagctttctctttcactccgaggattcacgcttcaaagtagatggcgac
gggacgctgaaactgaagagggggctgactctgcataatggacataaggagttctatgtc
tctacccattccaagggcaagaagttcacggttccagtcagagtgctgcatgaggccaga
catggccaccaccacaatcaccatgagatgaccacccagcccaagccagaaaaaagtctg
tctctacctgttctgaacttccccaagtcttcaggaggtctgaaaagaaggaagagggac
tgggtcattcctcccatcaacttcccagagaatgcccgaggcccgttccccaagaatatg
gtgcagatcaagtccagcaatgataaagaggtgaagatccagtacagcatcactggcact
ggggcagacctacctcctgtgggactcttcactgtggacaaaaactctggaatactctat
gtgacccagcctttggacagggagagaaaagaccaatacattctcctagcccatgctgtt
gcagtgggtgcaggtatagctgaggatcccatggagatcattgtgaaagtcatcgatatg
aatgacaacaaacctgtatttacccaagatccatttacaggaacagttcctgaagcatca
aaaccaggtgatgaggtcatgcaggtaacggccactgatgctgatgaggagggctctgcc
aattctgatgtcagatacaccattctcagtcaggagcctccactaccaagccccaacatg
tttgtcatcaaccctgtgactggagggattcgggttaacgcacctgggttggacagagag
aaatataccaaatatactttggcaatccaagctgccgatatggagggaaatggccttacc
agctttggcaaagccatcattacagtaacggacagcaatgacaacgcgccacagtttgtg
acgccttcgtacaccgtgtcagtcccagagaataaagtggatgccttggtggtgaaaatg
ccagtgactgatggagatgagcctcactcctctgcctgggccaccacctacaagatagtt
gacggggaccctcaaggccttttcagtgtgagcacaggccctagcaagctggagggcatc
attacaactgctaagccgcttgactttgagaagaacaacaagtacactctgctggtcact
gtgcagaatgaagtcccattcgcaatcagcctgcccacctccactgctactgttgtagtg
aatgtggaggatgtgaatgaagctccagtcttcaccccagtggagaagattatcaggaaa
cctgaggacctccctgttgacagtgacctggttctgtacaccgccacagacccagacact
gcaaggaatcagaaagtcacatacaagatacgcaatgatcctgctggatggctaaatatc
aacaaagacactgggctgatcaaagtcaagagcctcatggacagagaatccacttttgtc
caagacaacaaatactctgttgttgttctgggcatcgacaacgatgaaatcccggcaact
ggcactggtacccttatcatagagctggaggatgtgaatgataatgctccaaccatcgac
gagagtgtgatcagggtctgcaacaaggagtcctccccacagctgctgtcagtcactgat
aaagacagcgcgggctttgctgctccatacaccgtacagcttcaggggtcgtcccattct
aactggactgccagaatgaacgacacaaagacgggcattatcctgacactgaagactgtg
ttggacagtggagattacatggttgtcctgagagtgtctgacaaccagggcctgcaccat
gacagcaccatccaggcctccgtgtgtgactgcaaaggagcagatgtccagtgtaccgat
aaagctgtagcaggcttcggcatctctagcattctgggaattctaggagcagtcttacta
ctcctattgttgtctcttctgctgctcatgttcctgcggaagagaggtggtgagaagaag
gagcctctgctgcaagaggacgatgtcagggacaacatctactactatgacgaggaggga
ggtggcgaggatgaccaggatttcgacttgagtgtcctgcacagaggtctggataaccgt
cctgatgttttccgtaatgacatcgctccaaccatggcccggccagagtatcgtccacga
cccgccaacccagccgacattggcaacttcattgatgataacctgaaggcagctgacaac
gaccccactgcccctccctacgactccctcctggtgtttgactatgaaggaggtggctct
gaggccggctccctcagttccctcaattcctccaactcaggaggcgaccaggactacgac
ctccttcaagagtggggcccgcgcttcaagaagctgtctgacatgtacggaggaggagag
gattga
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