Oncorhynchus mykiss (rainbow trout): 110526307
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Entry
110526307 CDS
T07259
Name
(RefSeq) cadherin-15
KO
K06809
cadherin 15, M-cadherin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecule (CAM) interaction
omy04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110526307
04519 Cadherin signaling
110526307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110526307
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Major cadherins
110526307
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Sde0182_C
OCD_Mu_crystall
Motif
Other DBs
NCBI-GeneID:
110526307
NCBI-ProteinID:
XP_021462818
Ensembl:
ENSOMYG00000020290
UniProt:
A0A060XSK1
LinkDB
All DBs
Position
6:62723445..62742080
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AA seq
811 aa
AA seq
DB search
MLAQEMASRGLAVLCVLVAGLGQVGSSGQAGREDLNPAALYPWRQRSSGGLSRVKRDWII
PPIRVLENSKQVPENLVQIKSDKIFTGEVIYKLEGPGVDQDPKDLFEIDDKTGWIRSMIP
LDREKYRSFTLKAFALSPSGERLENPSTIEIVVLDQNDNRPNFSQKEFAGSVYEFSVPGT
SVMSVTATDADDPTTDNAILSYSIIGQESIPPLRINKTMFGINNETGAIYTRDVGLDWEV
VKGFRLKLQVADMSGMGLTSLANAVIHVTDINNNPPRFSPDLYTMSAVENKIDFVIGWVN
ATDNDEPGTGNWETKYTIAKGNPSRNFAIRTDPVTNEGILSVVKALDYESQEVYTLTLTV
ENVNPLSIKAPKNPVSSATVVVTVVNENEAPRFIKDPIEILVPESVDPGTVLASNIAYDP
DNAKLKYDILRDPEGWLIINHETGEIAARKPFNVLSPHVKNNIYNAVIRVTDTDAGGIST
TASLVITLWETNDFLPQLFPLMGTVCSESGRKASGLFLTAVDEDLPPHAEPFTFHLQDIN
VSANWTIIQVNETHAVLRPLVELETGEYGVTVLVTDSGTPSLSAYAQVNVTVCPCGKDGE
CKTEAAAIFGTRVGVSFIALLVIMASIALLLLLLLLAVAVGNCRRHHMKKGEGLLVGDSD
EDIRDNVLNYDEQGGGEEDENAFNIDLLRNPTDVGPLPISYYPPVSGIPRGKQPLRKDYP
DNLPSPSYPRKPPADPTDIEDFINDGLEAADHDPNIPPYDTALIYDYEGDGSLAGSLSSI
ASASSDGDQDYDYLNDWGPRFKKLANMYDPR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgctggcacaggagatggcatcaagggggttggcagtgctgtgtgtgctggtggctggc
cttggtcaggtcgggagcagtggccaagcgggcagggaggacctgaacccagcggccctg
tatccatggagacagaggagcagtgggggtctgagcagggtgaagagggactggatcatc
cctccaatcagggtgctggagaacagcaagcaagtccctgaaaacctggtccagatcaaa
tcagacaagattttcactggagaagtgatctacaagctggaaggaccaggggttgaccag
gaccctaaggacctgtttgagatagatgataaaacaggctggatcaggagcatgattccc
ctggacagagagaaatacagaagcttcacgctgaaagcctttgccctgtcgcccagtgga
gagagactggagaatccctccaccattgagatcgtagtgctggatcaaaatgataaccgg
cccaacttctcccagaaagagtttgctggatccgtttatgaattctccgtaccaggcaca
tctgtgatgtctgtgactgcgactgatgctgacgacccaaccacagacaacgctatcctg
agctactccatcattggccaggagagcatcccgcctctccgcatcaacaagaccatgttt
ggcatcaacaacgagacaggggccatttacacacgagacgtgggtctagactgggaggtg
gttaaaggctttaggttgaaactgcaggttgctgacatgtcaggcatggggttaaccagt
cttgcgaatgcagtcatacatgtgactgacatcaacaacaaccccccacgattctcccca
gacctgtacactatgtcagctgtggagaacaaaatagactttgtgattggctgggtcaac
gccacagacaatgatgagccagggacaggaaactgggagacaaaatacaccatcgccaag
ggcaacccctctaggaactttgccattcgcacagaccctgtgaccaacgagggtattctg
tcagtggtgaaggctctggactacgagtcccaagaggtgtatactctgactctgacagtg
gagaatgtgaaccctctcagcatcaaggcccccaagaaccctgtaagcagtgccacagtg
gtggtgaccgtggtgaatgagaacgaggccccacgctttattaaagaccccatagagatc
ttggttcctgagtctgtggaccctggcaccgtgctggccagtaacatcgcctacgatccc
gataatgcaaaactcaagtatgacatactcagagatcctgagggatggcttataatcaat
cacgagactggagaaatcgcagccaggaaaccgttcaatgtcctctcccctcacgtcaag
aacaacatttacaatgcagtcatcagagtcacagacacagacgctggtggaatctcgacc
acagcgtctctggtgatcacgttgtgggagaccaatgacttcctccctcagctgttcccc
ttgatggggacggtgtgcagcgagtcaggccggaaggcatctggtctgttcctgactgct
gtggatgaggacctgccccctcacgctgaacccttcaccttccacctgcaagacattaat
gtgtctgccaactggaccatcatacaggtcaatgagacacatgcagtgctgcgacccctg
gtagagctggagacaggggaatatggtgtcactgtgttggtgactgactctggcacccca
agtctcagtgcatatgctcaggtcaatgtgacggtgtgtccgtgtgggaaagacggtgaa
tgtaagaccgaagctgctgccatattcggaacacgagttggtgtcagcttcatcgcctta
ctggtcatcatggccagcatcgcactcctgctgttgttgctactcctggctgtagccgtg
ggtaactgcagacggcatcatatgaagaaaggagaaggtctgttggtgggggattcagac
gaagacatccgtgacaacgtcctgaactatgacgagcagggtggtggagaggaggatgag
aatgccttcaacattgacctactgaggaacccaacggatgtgggaccactcccaatatcc
tactaccctcccgtctctggcatccccaggggaaagcagccactcaggaaagactaccca
gacaacctgccctccccctcgtatccacggaaacccccagcggaccccactgacattgag
gacttcatcaatgatggcctggaggcagcagaccatgaccccaacatccctccctatgac
acagctctgatctatgactacgagggtgatggctccctggcaggcagcctgagctccatc
gcctcagccagctcagacggcgaccaggactatgactacctcaacgactggggaccacgc
tttaagaaactggccaacatgtacgacccacgctaa
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