Oncorhynchus mykiss (rainbow trout): 110526370
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Entry
110526370 CDS
T07259
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110526370
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
110526370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_8
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
ARM_TT21_5th
TPR_6
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
110526370
NCBI-ProteinID:
XP_021462962
Ensembl:
ENSOMYG00000044580
LinkDB
All DBs
Position
6:65833759..65843569
Genome browser
AA seq
1150 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQTKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLAKAGDKMRFDLVLASTEARQCSDLLSQAQYHVARARKQDEEEKE
IRAKQDQERDFLRQQMHKEQEEKRTKQEEDQKKLLEQRAMYVEKTKGLLSFADGMKEERK
EKKKGGGRRKKGGDFDEFVNDGSDEDLPVRRRKKRKGGSGSEEEGRKKRRRSNKGGDDGS
DDEEGGSRPKKQRKPRAGGKKFQRAEPVPPSLKGKIKSKAIISSSDSSSDEDGLKIAEDR
NPRDSGSGSDNESSHKKRIASDSESDGGRNRSGSDAGSPQRSGNSGSDSGSERPVKRKRV
QQQSDSEQSDNESKRSRSGSENESRPGSPAAASGSEAGSPAGSPRRSDNGSEPGGSANEA
SNHGSGSDSD
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggttcaattgaaatccccttacgggacaccgacgaggttattgagcttgat
ttcgaccagttgccagaaggagatgaggtcatcagtatcctgaaacaggagcacacacag
ttgcacatatggattgctcttgctctggagtattacaaacagacgaagacggaggacttt
gtcaagctgctggaggcggcccgtatcgatgggaacctagactacagagaccatgagaag
gaccagatgacctgtctggacaccttggcagcctactatgtccagcaggcacgtaaagag
aagaacaaagatgccaagaaggagctcatcactcaggccaccctgctctacaccatggca
gacaagatcatcatgtacgaccagaaccacttgttgggaagagcctgtttctgtctgctg
gagggggacaaaatggaccaggctgacgctcagttccactttgtcttgaatcagtccacc
aataacatccctgctctacttggtaaagcttgcatctccttcaataagaaggattacagg
ggagcactggcctactataagaaggctctacgcacaaaccctggatgtcctgccgaagtg
aggctggggatgggccactgctttgtcaagctcagtaagctggagaaggcccgtctggcc
tttggccgggccctggagctcaactccaagtgtgtgggagcccttgtgggcttggctgtg
ctggagctcaacagcaaggagcccgactccatcaagaatggagtgcagctcttatccaga
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctggctaaccacttcttc
ttcaaaaaggactacagtaaagtgcagcacctggctctccatgcctttcacaacacagag
gtggaagctatgcaggctgagagctgctaccagttggcccgctcctttcatgtacaggag
gactatgaccaggccttccagtactactaccaggccacccagtttgcctcgtctaccttt
gtgctgcctttctttggcctggggcagatgtacgtgtaccgtagagacaaggagaatgca
gcccagtgctttgagaaggtcctaaaggcctaccccaacaactatgaaaccatgaagatc
ctgggctctctttatgctacttcagatgatcaggaaaagagagacattgccaaaggtcat
ctgaagaaggtgaccgagcagtaccctgatgacgtggaggcctggatcgagctggcccag
atcctggagcagaccgacatccagggcgccctctctgcctacggcacggccacccgcatt
ctgcaggagaaggtccaggctgacgtcccccctgagatcctcaacaacctgggggctctc
cacttcagactggggaacctgggagaggccaagaaatacttcctggcttctttggagcgg
gccaaagctgagggcgagcatgacgagcattactacaacgccatctctgtcaccacctct
tacaacctagccaggctctacgaggccatgtgcgaattccacgaggcggagaaactctac
aagaacatcctgagggaacatcccaactacgttgactgttacctgcgtcttggggcaatg
gctcgtgacaaaggaaacttctatgaagcttccgactggttcaaagaggctctgcagatt
aatcaggatcacccagacgcctggtccctgatcgggaatctccacttggccaagcaggag
tggggtccgggtcagaagaagtttgagcgtatcctcaagcagccgtccactcagaacgac
acctactccatgctggccctgggcaacgtgtggctccagaccctgcaccagcccactagg
gaccgggagaaggaaaagagacatcaggatcgagccctggccatttacaaacaggtccta
cgaaacgactccaagaatctttacgctgccaacggcataggtgccgtcctggcccataag
ggctactaccgagaggcccgtgacgtgtttgcccaggtgagagaagccacagctgatatc
agcgacgtctggctcaatctggcccacatctacgtggagcagaaacagtacatcagcgct
gtgcagatgtacgagaactgtctgaagaaattctacaagcatcagaacactgaggtgctg
ctgtacctggctcgggcactcttcaaatgcgggaaactccaggagtgcaaacagactctg
ctgaaggcgcgtcacgtggcccccagtgacacggtgctgatgttcaacgtggccctggtg
ctgcagaggctggccactctggtgctgaaggatgagaagagtaacctaaaggctgtactc
agtgctgtcaaagagctggagctggcccaccggtatttcagctaccttgccaaggctggt
gacaagatgaggttcgacctagtgcttgcctccactgaggccaggcaatgctctgacctg
ctgagtcaggcccagtaccacgtggctcgggccaggaagcaggacgaggaggagaaggag
atccgggccaaacaggatcaggagagggacttcctgcgccaacagatgcataaagaacag
gaggagaagagaaccaagcaggaagaggatcagaagaagctgctggagcagagagccatg
tatgtggagaagaccaagggtctgctctccttcgccgatggaatgaaggaggaaaggaaa
gagaagaagaaaggtggcggccgacgcaagaaagggggtgactttgatgagtttgtcaac
gatggctctgatgaggacctgccagtgagaaggaggaagaagaggaagggtggcagcgga
agtgaggaggagggccgcaagaagaggaggagatccaacaaagggggtgacgatggcagc
gatgacgaggaaggaggctcacggcccaaaaagcaacgcaaacccagagcgggcggcaag
aagttccaaagggccgagcctgtgccaccgtctctcaaaggcaagatcaagtcgaaggcc
atcatctcatcctctgactcttcatcagacgaggatggactgaaaattgctgaagaccga
aaccccagagacagtggttcaggctctgataatgagagcagccacaagaagcgcatcgcc
tccgacagtgagtccgacgggggccggaaccgctctggcagcgacgctggaagcccccaa
cgctctggaaactcgggtagcgactcaggcagcgaacgtccagtgaagaggaagagagtg
cagcagcagtctgactcagagcagtctgataacgagagcaagaggagccgctctgggtcg
gagaacgagtcccggccaggctcaccggccgcagcctctggctctgaagcgggctctccg
gcgggctccccacgccgctccgacaatggatcagaaccagggggctctgccaacgaggcc
tccaaccacggctctggctctgacagcgactga
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integrated database retrieval system
