KEGG   Oncorhynchus mykiss (rainbow trout): 110526510
Entry
110526510         CDS       T07259                                 
Name
(RefSeq) plakophilin-3 isoform X1
  KO
K28841  plakophilin 3
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04382  Cornified envelope formation
omy04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    110526510
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    110526510
SSDB
Motif
Pfam: Arm ARM_ARMC5 Atx10homo_assoc ZER1-like_2nd BAR1_C WRM1_C
Other DBs
NCBI-GeneID: 110526510
NCBI-ProteinID: XP_021463211
Ensembl: ENSOMYG00000019428
LinkDB
Position
6:72117738..72135463
AA seq 667 aa
MSATVASESCFLSALQPNTAVTTYAVPSDVQLGPRGSIMDEVERAKRVQQQVNLRLAEKK
YSTLTRLNCSNCISPDHGGTMRFNTYNPGFSSKSMVYNTGSRTMKMPPVSQQYLGGGYSS
CSAVELGPRYRISQPPVNIGYLHHDDIQLGGYQTSRTRTARSRSVCQVSGGGSGSVCGGW
GQYQNSLHSLDMPTAVNYLFMSDTAMQVLGAAYIQHQCYHSSDAKNQVRLLKGVPALVQL
FSSDSQEVQCYATGATRNLIYENMDNKAALIEAEGITKLISVLNEPDEELHKNITGILWN
MSSKESLKEKLARETLSELTERVLVPLCSGGDPELIRQSPSEADIFYNTTGCLRNLSTVN
ERTRQQMRDMRGLVDSLVAYIQNSLQDEKSEDKGVENAVCVLSNLSYQLYSEIPPSTLLR
LEGPTWARATTGTESIGCFTPQSKKAKERRNQELSTSEVAKQPKGAEWLWHPQVVGLYNR
VLQHYETNTATREAAAGALQNITAGETRWASVLSWVALEQERMLPVVLDLLQTQSDQEMC
SLTGLLRNLSRDSRNKNDMSTKVVNVLVTKLPSDGHQKEPSGEVVVNICGILNNLVAGSS
LAARDITFFDGLPKLFAIKSSHNSSSGKLKAAKAASTVLFNMFQYSKLHKDYKQKGFTKC
HFTDTAI
NT seq 2004 nt   +upstreamnt  +downstreamnt
atgagtgcgaccgttgcttcagagagctgctttctgtctgccctacagcccaacaccgcg
gtcaccacttatgcagtcccgtccgatgtgcagttgggaccgaggggttccataatggac
gaggtggaaagggctaagagggttcaacaacaagtcaatttgcgcctcgccgaaaagaag
tattctaccctcacacggctgaactgctcgaactgcatttccccagaccatggtggcaca
atgagatttaacacgtacaaccccggattcagctctaagtcaatggtgtataacacaggg
agcaggaccatgaagatgcccccggtatcccagcagtacttgggaggtgggtactcgtct
tgctcagcggtggagttaggacctagatatagaatcagccagcctccagtcaacattggc
tacctccaccatgacgacatccagctgggtggctaccagaccagccggacgaggaccgcc
aggtccagatcagtttgtcaggtgtctggcgggggcagtggcagtgtgtgcggaggctgg
ggtcagtaccagaactccctgcacagtttagacatgcccaccgcggtcaactatctcttc
atgtccgacacagccatgcaggtgctgggagcagcctacatccagcaccaatgttaccat
agcagtgatgccaagaaccaggtgcgtctgctgaagggtgtcccagccctggtgcagctc
ttcagcagtgacagccaggaggtccagtgctatgctacaggcgctacacgcaacctcatc
tatgagaacatggacaacaaggcggccctcattgaggccgagggaataaccaagctcatc
agtgtcctaaacgaaccagatgaggagcttcacaagaacatcactggtattctgtggaac
atgtcctctaaggagagtctgaaggagaagttggccagagagacattgagtgagctcaca
gagagggtgctggtgcccctgtgcagtggtggagatccagagctgatccgtcagagtcca
tctgaggcagacatcttctacaacaccacaggctgcctgaggaacctgagcacagtgaat
gagaggacgaggcagcagatgagagacatgcgagggctggtggactcgctggtggcctac
atccagaactcccttcaggatgagaaatcagaggacaaaggtgtagagaatgcagtgtgt
gtcctgagtaacctgtcttatcagctgtacagtgagatccctccctcaaccctactgcga
ctggaggggcctacgtgggccagagccactactgggactgagtccattggctgtttcacc
ccacagagcaagaaggcaaaagagcgacggaaccaggaactgtccacctcagaggtggct
aagcagccgaagggggcggagtggctgtggcacccccaggtggtggggctgtataaccgc
gtgcttcagcactatgagaccaacacggcaacacgagaggctgcagcaggggccctgcag
aacatcacagccggagagaccaggtgggcgtcagtgctgagttgggtggctttagagcag
gagcggatgctgcctgtggtgctggacctcctgcagacacaaagcgaccaggagatgtgt
tccctcactggcctcctgaggaacctgtcccgagacagcagaaacaagaacgacatgtct
acgaaggtagtgaacgttctggtgaccaagctccccagtgatggccaccagaaggaaccc
tcaggtgaagtggtggtcaacatatgtgggatcctcaacaacctggttgcaggcagctca
ctagcagcgagagacatcaccttctttgatggactccccaaactttttgcaatcaagtct
tcccacaatagcagctcagggaagctgaaggctgccaaggctgcttccacagtactcttc
aacatgttccagtacagcaagctgcataaagattataaacagaaagggttcacaaagtgt
cacttcaccgacacggccatttag

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