Oncorhynchus mykiss (rainbow trout): 110526510
Help
Entry
110526510 CDS
T07259
Name
(RefSeq) plakophilin-3 isoform X1
KO
K28841
plakophilin 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04382
Cornified envelope formation
omy04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
110526510
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110526510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Atx10homo_assoc
ZER1-like_2nd
BAR1_C
WRM1_C
Motif
Other DBs
NCBI-GeneID:
110526510
NCBI-ProteinID:
XP_021463211
Ensembl:
ENSOMYG00000019428
LinkDB
All DBs
Position
6:72117738..72135463
Genome browser
AA seq
667 aa
AA seq
DB search
MSATVASESCFLSALQPNTAVTTYAVPSDVQLGPRGSIMDEVERAKRVQQQVNLRLAEKK
YSTLTRLNCSNCISPDHGGTMRFNTYNPGFSSKSMVYNTGSRTMKMPPVSQQYLGGGYSS
CSAVELGPRYRISQPPVNIGYLHHDDIQLGGYQTSRTRTARSRSVCQVSGGGSGSVCGGW
GQYQNSLHSLDMPTAVNYLFMSDTAMQVLGAAYIQHQCYHSSDAKNQVRLLKGVPALVQL
FSSDSQEVQCYATGATRNLIYENMDNKAALIEAEGITKLISVLNEPDEELHKNITGILWN
MSSKESLKEKLARETLSELTERVLVPLCSGGDPELIRQSPSEADIFYNTTGCLRNLSTVN
ERTRQQMRDMRGLVDSLVAYIQNSLQDEKSEDKGVENAVCVLSNLSYQLYSEIPPSTLLR
LEGPTWARATTGTESIGCFTPQSKKAKERRNQELSTSEVAKQPKGAEWLWHPQVVGLYNR
VLQHYETNTATREAAAGALQNITAGETRWASVLSWVALEQERMLPVVLDLLQTQSDQEMC
SLTGLLRNLSRDSRNKNDMSTKVVNVLVTKLPSDGHQKEPSGEVVVNICGILNNLVAGSS
LAARDITFFDGLPKLFAIKSSHNSSSGKLKAAKAASTVLFNMFQYSKLHKDYKQKGFTKC
HFTDTAI
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgaccgttgcttcagagagctgctttctgtctgccctacagcccaacaccgcg
gtcaccacttatgcagtcccgtccgatgtgcagttgggaccgaggggttccataatggac
gaggtggaaagggctaagagggttcaacaacaagtcaatttgcgcctcgccgaaaagaag
tattctaccctcacacggctgaactgctcgaactgcatttccccagaccatggtggcaca
atgagatttaacacgtacaaccccggattcagctctaagtcaatggtgtataacacaggg
agcaggaccatgaagatgcccccggtatcccagcagtacttgggaggtgggtactcgtct
tgctcagcggtggagttaggacctagatatagaatcagccagcctccagtcaacattggc
tacctccaccatgacgacatccagctgggtggctaccagaccagccggacgaggaccgcc
aggtccagatcagtttgtcaggtgtctggcgggggcagtggcagtgtgtgcggaggctgg
ggtcagtaccagaactccctgcacagtttagacatgcccaccgcggtcaactatctcttc
atgtccgacacagccatgcaggtgctgggagcagcctacatccagcaccaatgttaccat
agcagtgatgccaagaaccaggtgcgtctgctgaagggtgtcccagccctggtgcagctc
ttcagcagtgacagccaggaggtccagtgctatgctacaggcgctacacgcaacctcatc
tatgagaacatggacaacaaggcggccctcattgaggccgagggaataaccaagctcatc
agtgtcctaaacgaaccagatgaggagcttcacaagaacatcactggtattctgtggaac
atgtcctctaaggagagtctgaaggagaagttggccagagagacattgagtgagctcaca
gagagggtgctggtgcccctgtgcagtggtggagatccagagctgatccgtcagagtcca
tctgaggcagacatcttctacaacaccacaggctgcctgaggaacctgagcacagtgaat
gagaggacgaggcagcagatgagagacatgcgagggctggtggactcgctggtggcctac
atccagaactcccttcaggatgagaaatcagaggacaaaggtgtagagaatgcagtgtgt
gtcctgagtaacctgtcttatcagctgtacagtgagatccctccctcaaccctactgcga
ctggaggggcctacgtgggccagagccactactgggactgagtccattggctgtttcacc
ccacagagcaagaaggcaaaagagcgacggaaccaggaactgtccacctcagaggtggct
aagcagccgaagggggcggagtggctgtggcacccccaggtggtggggctgtataaccgc
gtgcttcagcactatgagaccaacacggcaacacgagaggctgcagcaggggccctgcag
aacatcacagccggagagaccaggtgggcgtcagtgctgagttgggtggctttagagcag
gagcggatgctgcctgtggtgctggacctcctgcagacacaaagcgaccaggagatgtgt
tccctcactggcctcctgaggaacctgtcccgagacagcagaaacaagaacgacatgtct
acgaaggtagtgaacgttctggtgaccaagctccccagtgatggccaccagaaggaaccc
tcaggtgaagtggtggtcaacatatgtgggatcctcaacaacctggttgcaggcagctca
ctagcagcgagagacatcaccttctttgatggactccccaaactttttgcaatcaagtct
tcccacaatagcagctcagggaagctgaaggctgccaaggctgcttccacagtactcttc
aacatgttccagtacagcaagctgcataaagattataaacagaaagggttcacaaagtgt
cacttcaccgacacggccatttag
DBGET
integrated database retrieval system