Oncorhynchus mykiss (rainbow trout): 110526579
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Entry
110526579 CDS
T07259
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
110526579
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110526579
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
110526579
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_spondin
PLAC
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
110526579
NCBI-ProteinID:
XP_021463345
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All DBs
Position
6:74777279..74795369
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AA seq
634 aa
AA seq
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MLSGLALLLLVCLLHMLVTAKGNPWSQSLGCDEYLGSGKVMDKCGVCGGDNTACKLVSGL
FQQHSLNKVGYHKIVEIPEGATKINVTETVKSRNYLALKSRSGRSIINGNWAIDRPGKYE
GVGTMFTYRRPNEVTSTAGESFLAEGPTNEILDVYVIYQQPNPGVSYEFILPSDNPPQHP
NHRPGGNTLHGQSGIDHRGNPNQEGYDPAGGGKYPPQVPNNQVPAVQPPKRQREYNWKLS
GATECSASCGRGSRYTIFRCVHRLSHEQVPGNQCDSSTRPSSQEEPCNLQSCPAFWDIGE
WSECSKTCGLGMQHRQVLCRQVYANRTLNVHTSRCRHLEQPETTSTCQLKICSEWQIRTE
WSACSVPCGVGQRTREVHCVSNMGDFVSNEECNMKLRPSDNENCDMGPCAKSWFFTDWGN
KCSAECGMGIRTRGVLCLTNHISSLPLEGCGHERPTDSQVCNHGPCESRIEWFTAPWSQC
STECGSGSQQRAVVCLMKSDEGFNVMPPYECSSLDKPLNQQSCHLKPCGAMWYHTDWSAC
SKTCEGGFRVREVRCLSDDMLSSEGCEEELKPVEREECNPEPCVPHIDENCRDKYFNCNV
VVQARLCVYDYYKTTCCASCTRVAHRQSQHRALS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgctatcaggtctggctcttctgctgcttgtctgcctcctccacatgttggtgactgcc
aaggggaacccgtggtcacagagtctgggctgcgatgagtacttgggctcaggcaaggtg
atggacaagtgtggggtgtgtggcggggacaacacggcctgtaagctggtgtcagggctc
ttccagcagcacagcctgaacaaggtgggctaccacaagatagtggagatcccagaggga
gccaccaagatcaacgtcaccgagacggtgaagagcaggaattacctggctctgaaaagc
cgctcaggtcgctccatcatcaatgggaactgggccattgaccggccagggaagtatgag
ggggtgggcaccatgttcacctaccgacgacccaatgaggtcaccagcaccgccggggag
tccttcctggctgaagggccaaccaatgagatcctggatgtttatgtgatctaccagcag
cccaacccaggagtgagctatgaattcatccttccctctgacaaccctccacagcacccc
aaccacagacctggagggaatactctgcatgggcaaagtgggattgaccaccggggcaac
cccaaccaggaggggtacgatccagcaggagggggcaaataccctccccaggtacccaac
aaccaggtgccagcggtccagccacccaaacgtcagagagaatacaactggaaactgtct
ggggcaacagagtgtagcgcctcctgtggcagaggtagcaggtacaccatcttccgctgt
gtccacagactgagccatgagcaggtaccagggaaccagtgtgacagcagcaccaggccc
agttcacaggaggagccctgcaaccttcagtcctgccctgccttttgggacattggtgag
tggtcggagtgcagtaagacatgtggcctgggtatgcagcaccgccaggtcttgtgcagg
caggtgtatgccaaccggacccttaacgtccacaccagccgctgccgccacctggagcag
cccgagaccaccagcacctgccagctgaaaatctgcagcgagtggcagatacgaaccgag
tggagcgcctgctctgttccctgtggcgtgggccagaggaccagggaggtgcactgtgtc
agcaacatgggagactttgtgtcaaacgaggagtgcaacatgaagctgcgacccagtgac
aatgagaactgtgacatggggccctgtgctaaaagttggttcttcactgattgggggaat
aagtgttctgctgagtgtgggatgggcatccggacccgtggcgttctgtgcctgaccaat
cacattagcagcttgcctctggaagggtgtggccatgagcgccccactgactctcaggtc
tgtaatcacggcccctgtgagagtcgcatcgagtggtttacagccccctggagtcagtgt
tcaacggagtgtggctcgggcagccagcagagggcagtggtgtgtctgatgaagtcagac
gaggggttcaatgtaatgccgccctacgaatgttcttctctagacaagcctcttaatcag
cagagttgccacctcaagccctgtggggccatgtggtaccacacagactggagcgcttgt
tctaagacgtgtgaggggggcttccgtgtgagggaggtgcgctgtctgtctgatgacatg
ctttccagtgagggctgtgaagaggagctgaaaccagtggagagagaggagtgcaaccca
gagccctgcgtcccacacatagacgagaactgtcgagacaagtatttcaactgcaatgtg
gtggtccaggcacgtctctgtgtgtacgactactacaagacaacctgctgtgcctcctgc
acacgagtggcccacagacagtcacaacacagggcactcagctag
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