Oncorhynchus mykiss (rainbow trout): 110526599
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Entry
110526599 CDS
T07259
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04217
Necroptosis
omy04622
RIG-I-like receptor signaling pathway
omy04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
110526599 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
110526599 (cylda)
04625 C-type lectin receptor signaling pathway
110526599 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110526599 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110526599 (cylda)
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110526599 (cylda)
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C67
110526599 (cylda)
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110526599 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
110526599
NCBI-ProteinID:
XP_021463375
Ensembl:
ENSOMYG00000040439
UniProt:
A0A060Y891
LinkDB
All DBs
Position
6:75779416..75815231
Genome browser
AA seq
959 aa
AA seq
DB search
MSSALWSQEKPSGGFREDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
PSKGKRSLRVLDQTNVVLSLDERDVLELDEKLAELLFPITNCEERYALLCNKPRLERARD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGVWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWDDEEEELGELEVDHVILVEEEMDFHPLEINSRVLVQTRE
GPERGTIIFCDLLPGNESLGYYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDV
MPEYSMQDQRLQKHSFTPRGSSSDKSSGQSKPKSKGLGLQCGSRSKSELYYTLNGSSVDH
PVQAKSKSTWYIDEVGEDPAKSLTDTPPDFNETTPPTRAPPSASLSNDNKFHSLPFSLSR
KTGPNGSMSHGPLSLSVQSVMGEQMPEPPSSSPPSPRPPSPPSSRGGGGVPGLEVGSLVE
VKENPPLCGVIRWVGQPPGLPEPLAGLELEEECVGCTDGTFQGTRYFSCAPKKALFVKLK
CCRPDSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDIMVGKKKGIQGH
YNSCYLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCAT
KVMKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQI
FMDKKDKVGVPTSQQLIEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDI
TDLLEDTPRECRICGGLALYECRECYEDGDITAGKIKQFCEKCNTQVHLHPRRKAHRHGK
LSVPKELQEGVWRQGSFPRQRMELFAVLCIETSHYVAFVKYGHQDSAWLFFDSMADRDGG
QNGFNIPQVSPCPEVGAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggagccaggagaagcccagtgggggcttcagggaggactggcgc
ttctacatggtggtcaaggagtgtacagtggagaagcccccccagaagaccttgaggatc
ccccggggcagcctgggacaggcctgtcaggagaggaacagcctggggcgcacgctgccc
cccagcaaaggcaagaggagcctacgcgtcctggaccagaccaacgtggtgctgagcctg
gatgagcgggacgtcctggagctggatgagaagctagctgagctgctgttccccatcacc
aactgtgaggagcgctatgccctgctgtgcaacaagcccaggctggagcgggccagagac
atcgactgtggctccaaggtgcgcgtgcagctgcgttcgggggatgaacctttgcccggg
gtagtccgatttaaaggatctctcctcccagacagggctctctccggggtctggtttgga
gtggagctgctggaggagggcagaggccagggcttcacagagggctcctaccagggccga
cagctgttccgctgtgaagatgagtgcggggtgttcgtggccctggacaagctggagctg
tgggatgacgaggaagaggagctgggagagctagaggtggatcacgtcatcctggtggag
gaggagatggatttccatccgctggagatcaactccagggtcctggtccagaccagagag
gggccggagaggggaaccatcatcttctgtgacctgctgcctgggaacgagagcctgggg
tactatgtgggagtagacatggacaatcctattggggactgggatggtgttatcgatggg
aagctgctgtgtaatttcgccagtctggaacacacccgtctagtccccatctgtgacgta
atgccagaatactccatgcaggaccagaggctgcagaagcacagttttacccccagaggc
agcagcagtgacaagtcctctggccaaagcaaaccaaagagcaaaggcttaggtcttcag
tgtgggagtagaagcaagtcagaattgtattatactttaaatggcagctctgttgaccac
ccagtccaggccaaatccaaaagcacatggtacattgatgaagtaggggaggaccctgcc
aagtccctcacagacacgccccctgacttcaatgaaaccacacctcctaccagggccccg
ccctctgcttccttgtccaatgacaacaagttccactccctgcccttcagcctgagccgt
aagacggggcccaatggcagcatgagccatggacccctctccctctccgtgcagtcagtg
atgggagagcagatgccagagcccccatcgtccagccctccctccccgaggcccccctca
ccccccagctctcgcgggggtggcggagtacctggtctggaggtggggtccctagtggag
gtgaaggagaacccgcccctgtgtggggtcatccgctgggtggggcagcccccgggacta
ccagagccactggctggcctggagctggaggaagagtgtgttggctgtacagacggcacc
tttcaaggtacccgctacttcagctgcgcgcccaagaaggccctgtttgtgaagctgaaa
tgctgccggcccgactcccgtttcccctccctacaccactcctccaaccccatagagaga
tgcaactctatcgctttcgggggttatctgagtgaggtggtgcatgagaacactcctcca
cgcactgagaatgacggtctagacatcatggtgggcaagaagaaaggtatccagggacac
tacaactcctgctacctggactccacactcttctgcctgttttccttcagctcagtcctg
gacacagttctgctgaggccgaggtccaagactgacgtagagtattaccgagagacacag
gagctgctacgcacagagatagtcaaccccctgcgcatacatggctatgtgtgtgccact
aaagtgatgaagctcagaaggatactggagaaggtagaagctgcctcagggttcacatct
gaagaaaaagatcctgaggagttcctcaatattctgttccatcacatattgagggtggac
cccttactcaagctgaggtcggcaggtcagaaggttcaggactgctacttctaccagatc
ttcatggataagaaggacaaagtgggcgtgccaaccagccagcagctcatagagtggtcc
ttcatcaacagtgacctcaagtttgctgaggctccttcctgccttatcatccaaatgcct
cgctttgggaaggacttcaagatgttcaacaagatcttcccctcactagagttagacatc
acagacttacttgaagacactcccagggagtgtcgaatctgcgggggtctggctctgtat
gaatgcagggagtgctacgaggacggtgacatcactgccgggaagataaaacagttctgt
gaaaagtgcaatacacaggttcacctccacccgaggaggaaggcccatcgccacggcaag
ttgtccgtccccaaggaactgcaagagggtgtgtggcggcagggtagcttccctcgccag
cggatggagctgttcgctgtgctctgcatcgagaccagtcactacgtagcgttcgtcaag
tacggccaccaagactctgcatggctcttcttcgacagtatggccgaccgcgacggaggg
cagaatggcttcaacatcccccaggtgtctccatgtccggaggtgggggcctatctgaag
atgacccctgaggagctgcacgccctggaccccaagagcatccagggccaggcccgccgt
ctgctgtgtgacgcctacatgtgcatgtaccagagccccaccatgagcctgtacaagtag
DBGET
integrated database retrieval system
