Oncorhynchus mykiss (rainbow trout): 110526610
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Entry
110526610 CDS
T07259
Symbol
irx5a
Name
(RefSeq) LOW QUALITY PROTEIN: iroquois-class homeodomain protein IRX-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110526610 (irx5a)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
110526610 (irx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
110526610
NCBI-ProteinID:
XP_021463396
Ensembl:
ENSOMYG00000043710
LinkDB
All DBs
Position
6:77495753..77499433
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AA seq
451 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGTTAFTSASPG
YNSHLPYSAEAGAAATFASYVSSPYDHTTGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPSKPTDKGDSTDTESDHKLLNPGDIVCDRFKEENHGKET
DPLLSDSELKDQGDRTELLPESAKPTTSSPTAVPRGGTELVAQDKPSEMGHAPGTVNSNV
TSVIHSSPSAPKPKLWSLAEIATSSDRCKSSHDGPQGHGMGHSTVITTNAASPSRSSPQC
PLPNSTVLSRPIYYTSPFYPGYTNYGSFGHLHSHNNHGSGTGSTAHFNGLNQTVLNRAEA
LVRESQKGRGQTQVDLCKDSPYELKKGMSNI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctatttgtaccagccatccgcttcgttggcgctgtattcatgc
ccggcgtacagcaccagcgtaatatcgggacccaggaccgaagaacttggtagatcctca
tctggctcagcttttgctccctatgccggaactaccgcgttcaccagcgcttcgcccggg
tacaactcccatctcccgtacagtgcggaggcgggagcggccgccacattcgcttcatac
gtgagttctccctatgaccacacgacgggaatggctgggtctataggatatcacccctac
gctgctcccctgggttcatacccctacggtgacccggcataccgaaaaaacgcgacccgt
gatgccacggccactctcaaagcctggttgaacgagcaccgtaagaacccctaccccacc
aagggggagaagatcatgctggccatcatcaccaaaatgaccctcacccaagtttccacc
tggttcgccaacgccaggaggaggctaaagaaggagaacaagatgacctggactccccga
aaccggagcgaggacgaggaggaagacgagaacatcgatctggaaaagaatgacgacgac
gagcctagcaagccgacagacaagggagactcgacagacacagagtcagatcataaattg
ctgaacccgggggacatagtgtgcgacagatttaaagaggagaatcatggcaaagaaacg
gatccccttctgagtgactcggaattaaaagaccagggggatcggacagagttactgccc
gagtctgctaaacccaccacctcgtctccaaccgccgtgcctcggggaggaaccgagctc
gttgcgcaagacaagccgtcagaaatgggccatgcgccgggcacggtaaacagcaacgtg
acgtctgttattcactcctccccatcggcccctaaacccaaactctggtccctggctgag
atcgcaacgtcctcagacaggtgtaagagcagccacgacgggccgcagggccatgggatg
ggtcacagcacagtgatcaccaccaatgcagcgtcaccatcacggtcctccccacagtgc
cctctcccaaacagcacagtcctatccaggcctatctactacacgtcccctttttacccg
ggctacacgaactatggcagctttggacatcttcacagtcacaacaatcacggctcaggc
acgggctccacggcacatttcaatggattaaaccagactgtgttaaatagagcagaagct
ttggtaagagaaagccagaaaggcagaggccaaacgcaggtagatctttgtaaagactcc
ccttatgaactaaagaaaggtatgtcaaacatttaa
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