Oncorhynchus mykiss (rainbow trout): 110526630
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Entry
110526630 CDS
T07259
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04260
Cardiac muscle contraction
omy04261
Adrenergic signaling in cardiomyocytes
omy04814
Motor proteins
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110526630
04820 Cytoskeleton in muscle cells
110526630
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
110526630
04261 Adrenergic signaling in cardiomyocytes
110526630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110526630
04147 Exosome [BR:
omy04147
]
110526630
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
110526630
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of microglial cells
110526630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
Crescentin
DUF745
ATG16
Lebercilin
DUF3450
CENP-F_leu_zip
TMF_DNA_bd
PUMA_CC
NBP1
MscS_porin
DUF16
DUF1664
EzrA
Laminin_I
SlyX
XhlA
FPP
Fez1
Motif
Other DBs
NCBI-GeneID:
110526630
NCBI-ProteinID:
XP_021463435
UniProt:
A0A8C7V8M8
LinkDB
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Position
6:78366733..78379992
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDDLVALQKKLKGTEDELDKY
SESLKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRASKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEINVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgcttaaactcgacaaggagaatgccctggac
agagctgagggagctgagggagacaagaaggcagcggaggacaagagcaaacagcttgag
gatgacctggtagcgctgcagaagaagctgaagggaacagaggatgagttggacaagtac
tctgagtctcttaaggatgcccaggagaaacttgaactcgctgagaagaaagccacagac
gccgaggctgatgtagcttccctgaacagacgtatccaactggttgaggaggagttggat
cgtgctcaggagcgtctggccacagctctgaccaagctggaggaggctgagaaggctgct
gatgagagtgagagaggcatgaaggtgattgaaaacagagcatcgaaagatgaggagaag
atggagctgcaggagatccagctgaaggaggctaagcacattgctgaggaggctgacagg
aaatacgaggaggtcgcccgtaagctggtcatcattgagagtgatctggaacgtacagag
gagcgtgctgagctctctgaaggcaaatgcgctgagcttgaggaagagttgaagacggtc
acaaacaacctgaagtctcttgaggctcaggcagagaagtactcacagaaggaggacaag
tacgaggaggagatcaatgttctcacagacaagctaaaggaggctgagacccgtgctgag
ttcgctgagaggtccgtggccaagcttgagaagaccattgatgatctggaggatgagttg
tatgcacagaagctaaagtacaaggccatcagcgaggagctggaccacgccctcaacgac
atgacctccatttaa
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