Oncorhynchus mykiss (rainbow trout): 110526924
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Entry
110526924 CDS
T07259
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110526924
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110526924
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110526924
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110526924
NCBI-ProteinID:
XP_036836325
Ensembl:
ENSOMYG00000008086
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Position
6:complement(53828781..53888622)
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AA seq
767 aa
AA seq
DB search
MDFSEQREMAKQPANAPTGCNPLQQPEGVSANKPDNAFNQTSAAYPAPQPAQSNESKTFC
PTENKPGEPGEVKVYGTFKNAALPVPGSVAALSAARDIPVQYGDPLRVTGDQNNASGNWT
TMSQTTIILGADGNTSVQPGAVMGEEDEDESGDENKARGNWTNKLDFILSMVGYAVGLGN
VWRFPYLAFQNGGGAFLIPYLIMLCLAGIPIFLLEVSLGQFASQGPVSVWKAIPALQGCG
IAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCKNEWNTLDCKDKDMLLLETCIL
HDKNITSVKNSSFCLSAQAIGNLTKLVNMTFPDNKTYVSPSEEYFKYNVLHISKGIEYPG
DIRWPLAGCLLLAWLIVYLSLAKGIKSSGKVVYFTATFPYVVLVILLFRGVTLPGAGDGI
LYFITPKWEKLNDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCYRDTIIVCIVNS
ATSIFAGFVIFSVIGFMAHELKVPIEKVADEGPGIAFVVYPEALTRLPLSPFWAIIFFLM
LLTLGLDTMFATIETIVTSVSDEFPQYLRKNKPLFTLICCACFFFLGFPMVTENGMYMLQ
LVDTYAASYSLVIIAICELIGISYFYGLQRFCEDIEMMIGFQPNRFWRICWAFVTPTILT
GILGLSLYQWKVMTYEDYTYPTWSMVMGWLMVLCSVIWIPIMFVIKMHLAPGSFTERLKL
VCSPQPDWGPFLAKHRGERYKNMMDPHGSNSLGLKLPPKDFQLGAYQ
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggatttctccgagcagagagagatggccaaacagccggccaatgctcctaccggttgt
aacccgttgcaacagccggagggagtttcagcaaacaaaccggataatgcctttaaccaa
acgtccgcagcatacccggcccctcagccagcacaatccaacgagagcaaaactttctgt
cccacggaaaataaaccaggagaaccgggagaagtcaaagtctatgggacgtttaaaaac
gccgctctgccggtgcctggatccgtggctgctctctcggctgcccgggatatccctgtc
cagtacggggacccgcttagggtcaccggggatcaaaacaatgcatcgggcaactggacc
accatgagccagaccaccatcattctgggcgcagatggcaacacgtctgttcagcccggc
gcggtgatgggggaggaagacgaggacgagagtggagatgagaataaggccaggggaaac
tggactaataaattggatttcatcctgtccatggttggctatgcggtgggactgggaaac
gtgtggaggtttccataccttgccttccaaaatggtggaggtgcttttttgatcccctac
cttataatgttgtgcctcgccgggatccctatctttttattggaggtttccctgggtcag
tttgccagccagggccccgtgtccgtgtggaaagccatcccggctctgcaaggttgcggg
attgccatgttgataatatctgtcttgatagccatatactataacattattatgtgctgg
acactgtactacctgttcgcttcgttgaagggctcactgccatgggctaactgtaagaac
gagtggaacacgttggactgtaaggacaaagacatgcttctcttagagacgtgtatcctc
catgataaaaacatcacctctgtaaagaacagctcgttctgtctgtcggctcaagccatt
ggaaacctgaccaaactggttaacatgacctttccggataacaaaacttacgtcagcccc
agcgaggagtacttcaagtacaatgtcttgcacatctccaaagggatagagtaccctgga
gacatccgctggcccctcgcaggctgcctgttgctggcctggttgatagtctacctctcc
ctggccaaaggaatcaagtcatcagggaaagtggtgtatttcacagctacgttcccctat
gtggttctggtcattctgttgttcagaggagtgaccctcccaggggctggtgacggcatc
ctctacttcatcacacccaagtgggagaaactcaacgatgctaaggtttggaaggatgct
gccacccagattttcttctctctgtcagcagcctggggaggcctcatcacactgtcttct
tacaacaagttccacaacaactgctacagggacaccatcatagtgtgcatagttaacagt
gccaccagtatattcgctgggttcgtcatcttttccgtcattggattcatggcccacgaa
ctgaaggtgcccattgagaaggtggctgatgaaggtccaggcatagcgttcgtggtgtac
ccagaggctctgaccagactcccactctctcctttctgggccatcatcttcttcctcatg
ctgctgaccctcggcctggataccatgtttgccaccattgagaccatagtgacgtcggtg
tcagatgagttcccccagtacctgagaaagaacaagcctctgttcacactcatctgttgt
gcctgtttcttcttcctgggattccctatggtcacagagaatgggatgtacatgctccag
ttggtagacacatacgctgcctcttactctctggtaatcattgccatctgtgagctgatc
ggaatctcctacttctatggcctgcagaggttctgcgaggacattgaaatgatgattggc
ttccaaccaaaccgcttctggagaatctgctgggcctttgtgactcctaccattctgact
ggtatcctggggctgagtctgtaccagtggaaggtgatgacctatgaggactacacctac
cccacctggtccatggtgatgggctggctgatggtgttgtgttctgtcatctggatccca
atcatgtttgtcatcaaaatgcacttggccccaggcagctttacagagcgtctgaagctg
gtgtgttcccctcagcccgattggggtcccttcctggccaagcacagaggggagcgctac
aagaacatgatggacccccatggatccaactccctgggcctcaaactgccccccaaagat
ttccagctgggcgcctaccagtag
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