Oncorhynchus mykiss (rainbow trout): 110526966
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Entry
110526966 CDS
T07259
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110526966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110526966
03036 Chromosome and associated proteins [BR:
omy03036
]
110526966
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110526966
Coactivators
SAGA/TFTC/STAGA complex
110526966
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110526966
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
110526966
NCBI-ProteinID:
XP_036836869
LinkDB
All DBs
Position
6:complement(75204424..75315717)
Genome browser
AA seq
994 aa
AA seq
DB search
MASTSDPLEDMLFSEVDEKAVSDLVGSLESQLVGQSNPADTQSENRGAGCTFTANHHLGK
TLPAQVGTTLVQQQQGQHKAGMHQEKNSKEISLEKTVTSSSLSSIPSFEEASTTSGTGVN
ATKSGLQSHGTSSITTLPAFGGVATSPLVNSISSTTTSRGSALASGQTSTDIVDHPRKRI
TASLRSASAGIQSLNGTGGAVTSRNNPPAAGTAALISSASAANSSRTVDVTSCVNTTNFT
LSNSRISSTQSAIPLDKGTPTIALQRLPNHIVASIAHNGNGTTVSALVKQGAIGPITCAA
ASQVNHKKEGSEAKSGAPVQSKIVMSSPLGVVNSVINSVYSPSAVSNIAAATTASHVMAK
PAVNIVGQTTTVGMVRPASPAVATATQPLLRPGVPAAQRTVAPQLIVRPPQQPQTTIQLP
PGFTIPPGMVLVRTEMGQLVMVPQQALAQAQAQAQAQAQNNISPRTATPTAGATFRATTL
QKGPMAPAVAVTAPQQAPVVMAPQVQAGAQAASQPALPPQTSVPVAPGASVISQEMQENV
KKCKNFLATLIKLASHNSPSPETSKNVKSLVQDLLDAKIEPEEFTNRLQSELKSSPQPYL
VPFLKKSLPALRLSLLNIQHSLIQPLPQAKATPTPTTGTSSAIMAGPAVRGRLPNSVSTT
GASVGAQGHTAALGIKQAGTAGCQVRMPMLITPLRTQGTVSKGAMFQAGKSPVGFAVKGS
GNQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSELVGTHIRSCKDEAFL
HPGLLHRRILETAKKFGVSEVPMEAVNFISHATQSRLRTVLEKVSSIAQHRMDGGKDEEW
FEQSADVRSQLKFFEQLERIEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQ
QEMALVRQRDANLTALAAIGPRKKRKMDSPGATPSGAEVSGSSVGSPGAASSPSTSSQRQ
RQRITRVNLRDFIFYMEQERETAHSLLLYRALLK
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacctccgacccactggaagatatgctattttctgaggtggatgaaaaagct
gtgagcgatttagtgggctctttggagtcacaacttgttggacaaagcaaccctgcagat
actcagtcggaaaacagaggtgctgggtgtacattcactgcaaaccatcacttagggaaa
acgctaccagcccaagtgggtactacactagtacagcagcaacaaggacaacataaagct
gggatgcaccaggagaaaaactctaaagaaattagcttagagaaaactgttacatcttct
tcgctgagttctattccgtcctttgaggaagcttccaccacttcagggactggagtaaac
gctaccaagagcggtttgcaatcacatggaacatcgtctatcacaacactacctgcattt
ggtggtgtagcaacttctccgcttgtcaacagcatcagcagcaccactaccagccgaggt
tccgctctggcttcaggtcagacatcaacagacattgtcgatcatccaagaaaacgtata
actgcatcgttacggagtgcatccgcgggaatacagagtttgaacggtaccggaggagcg
gtaacgtcaaggaataatccccctgcggcgggaactgctgcgttgattagcagtgcaagt
gcagcaaactcaagtcggaccgttgacgttacatcttgtgtaaatacgacgaatttcact
ttatctaactccagaatttcttcaactcaatcagcgattcccctggataaggggactcct
actattgctttgcaaagactaccaaatcacattgtagcgagcatcgcacataatggaaat
ggcactaccgtctcggccttggttaaacaaggcgcgataggaccgatcacctgtgcagca
gcttcgcaagtgaaccacaaaaaagagggttctgaagcgaagtcgggcgctcccgtacag
tccaaaatagtcatgtccagtccgttaggtgttgtcaattccgtaataaactctgtttac
tctccctctgctgtttccaacatagcagcggcgactacagcaagtcatgtcatggcaaag
cctgctgtcaatattgttggacaaacaacaactgttggaatggtaaggccagcgtcaccg
gctgtggccacagctacacagcctctgcttcgaccgggagtcccagcggctcaaaggact
gtagccccccagctgattgtcagacccccccaacaaccacagacgaccattcaactgcct
cctgggtttaccatcccaccgggaatggtgttggtgcgcactgagatgggtcagctggtg
atggtcccacagcaggcccttgcccaggcacaggcccaagcccaggcccaggcccagaac
aacatctccccccgaactgccacccccactgcaggggccaccttcagagcaactacccta
cagaagggccccatggcgccggctgtggcagtgacggctccccaacaggcccccgtggta
atggccccccaggtccaggctggggcccaggctgcctcacagccagccctgcccccacag
accagcgtccctgtagccccaggagcctctgtcatctcccaggagatgcaggagaatgtg
aagaagtgtaagaacttcttggccaccctgataaagctggcttcccacaactctccgtca
cctgagacctccaaaaatgtcaagtcactggtccaggatctactggatgctaagattgag
cctgaggagttcaccaacagactgcagtcagagctcaagtcgtctcctcagccctacctg
gtccccttcctcaagaaaagcctcccggccctgcggctgtctctgctcaacattcagcat
tccctgatccagcctctgccgcaggccaaagccacccccacccccaccacaggcaccagc
tctgccatcatggccggcccagctgtccgcggccgcctccccaacagcgtcagcaccacg
ggggccagtgtcggggcccagggacacacagctgccctgggtatcaagcaagcgggcacc
gctggttgccaggtcaggatgcccatgttgatcacaccattaagaacacaaggcactgtc
agcaagggagccatgttccaagcaggcaaaagtcctgtgggttttgctgttaagggctct
ggaaatcagaaaaacaagctgaacgatcccggaggcggttctttcagggatgatgatgac
attaacgatgtggcgtccatggcgggggtgaacctgaatgaagagagcgctcgtatcctg
gcaaccaactctgagctggtggggacacacatccgctcctgtaaagatgaggccttcctt
cacccgggcctgttacacagacgcatcctggagacagctaagaagtttggcgtgtcagag
gttcctatggaggctgtgaacttcatctcccacgctacccagtcccgactccgcactgtg
ctggagaaggtctcctccatcgcacagcacaggatggacggtggtaaagatgaggagtgg
tttgagcagtcggcagacgtgcggtcgcagctaaagttctttgagcagctggagaggata
gagaagcagaggaaggatgaacaggagagagagatcctactcaaagcagctaaaagtcgc
tccaggcaagaggacccagagcaggctcggctgaaacaaaaagctaaggagatgcagcaa
caggaaatggccctggtgaggcaacgagacgcgaacctgaccgcgctagctgccatcgga
cctcggaagaaacgcaagatggactcgccaggggccacgccgtcaggggccgaggtatca
ggcagctcggtggggtcgccgggcgccgcctcctccccctccacgtcatcacagcggcaa
cgtcaacgcatcacccgcgtcaatctcagggacttcatcttctacatggagcaggagaga
gagacagcccactcacttctgctctaccgggctctgctcaagtaa
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