Oncorhynchus mykiss (rainbow trout): 110526988
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Entry
110526988 CDS
T07259
Name
(RefSeq) pro-interleukin-16-like isoform X1
KO
K22628
interleukin 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110526988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110526988
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Interleukins
110526988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
110526988
NCBI-ProteinID:
XP_036819333
LinkDB
All DBs
Position
26:complement(43896015..43949012)
Genome browser
AA seq
1653 aa
AA seq
DB search
MMIDYECPSPLACVPAGRSVCESVLAPHTHTHAAHTHTLTAMPQRYSYQKRKASTAAARR
MERRGMDTGKTNNTNTSHSHRSKKLAMLSRSLILCHSRASDDCPSPEERPPGEAWKGDGG
LGRDGKGNREVERSQKKIQEGPQESGGTMQASTQPPVGATNTLRATGEHKRNMRRSFSIK
ESSIWRMCVTTGAGEEGLGRQTGDSSPQTEDKEPSVERGRKGGGDGHSYLQSTDKPAPFN
GQCLNGHGRTEGERQAKNGHAARTEGEGGRQAASRNSHITAYSEESSTCEQQPQSPGGLT
LAPLHSAPLCLADPLAVTNYTETEQTGNNNHLKLAIPEVNEDRGWDTERRGHGLQGQTVC
KRTRSNSTSVHPYWIGDLDTIILKTPELCGSNTHGTVGFFGSRKSQSQQLEFPHNPNQPV
PRPSRSLSSAHLVHSCSNVQAFIICNIVLMKGHGKGLGFSIVGGRDSMYGPMGIYVKTIF
AGGAAAADGRLQEGDEILELNGESLHGLTHEDALQRFKQIKKGLLTLVVRTSLRVGALCG
QAAVAQLCRSRSLSSSTGMSRVSTEMGDYNYLSDVATANTHTNTVPQPPLAKPRDRVMME
ITLHKEAGVGLGIGLCCVPSGDGCRGIYIHTLSPGSVAHMDSRLRCGDEIMEINNTVVYN
MVLNDVYTVLSQCSPGPVQIIISRHPDPKVSEQQLNDAIAQAVETSQLKQDASLRRSDPC
SHSRGKCERCVARSFSQLTARRAQKNMTRSCSDSNTYNQNHHHNHQHNRCPGPGTNLVNG
QTLTIPNHNMHHNLMERVHSLDIPMGSTPEPWCDNRLSALVYPIPDDDYNVPYNSPAANL
SCQRTLDLATRGNKNRPKALAPPRRYCRHQDVTSEEGAPGGLPDSNVSSRGSPVREDGWS
PTHTNCQEVESEREREREREREHSRGSGETLTHSEARSAAITDCPRYSSCTEDRLHTGAE
SAFHLCSQSKRPGLRRQGRVEQLPPEKLHDPWVRISDSAPDLGGPEDPHQNQSLTHPSTH
RHNTHSHSSTHQQQAHHLSSHHDATHTPSQTDRHPNDTHSPVAMSQPSEFPELPEFNCTS
THHTAPDPTTPSTPASLISTPSPRTEDPPGVRKGPPVAPKPVWNRQSLRSIRNGRPQAEL
AKPLDIRGGGTTFGVRLRPTSSTAQLSIKQKIHSFETFSSPEGKGQEMEGNNRRPLAPST
SLPLKDKALVRSDPPLLEENGTIQHDMGKGAKVTSPIPDEDKDRRMSSFPPGASPHSILP
PSPASHPSPPTCFSLLPTPHPTSELQTPVEETTDPNAEISDSPSPDDTTTSPSTLEAPLP
EAEPETEPLDGAVEASISPSGPVPRRSSSSKGESFGPLQPPEEEEGDQNHAQAQGKQASL
RTRSLPLPTSPSPDGSTTLQGLEGESLGKILSFSNQVSHALMRSMHSLLPSLYPTRPGNP
GSDPPLVSPLVCSPEEPDQVQNTPLSPGPDSNENSFSVSLSDLRQCTIERGEEGGDLVSR
PSPSACAHSVISAIPPQEIQTMIQEVKALDEETLKQFEHIQVVILHKEEGAGLGFSIAGG
IDLESKATTVHRVFPHGLAAQEGTVEKGDEVLSINGQTLRGATHADATATLRQARTMRLA
VVVVSKGREGGGGNKTDDYSVSSSSTDLNPTGE
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgatgattgactatgagtgtccctctccattagcctgtgtgccggctgggaggagtgtg
tgtgagagtgtgttagcaccacacacacacacacacgcagcacacacacacactctaacg
gccatgccccagagatactcctaccagaagaggaaagccagcacggcagcagctcggagg
atggagaggcgaggcatggacactgggaagaccaacaacaccaacactagccacagccac
cgctccaagaagctagccatgctctccaggtccctgatcctctgtcactccagagccagt
gatgactgccccagccccgaagagagaccgccaggggaggcctggaagggagacgggggc
ttggggagagatgggaaggggaacagggaggtggagaggtcccagaagaagatccaggaa
ggaccccaggagagtggaggaactatgcaggcatctacacagccacccgtaggggccacc
aacacactcagggctacaggagaacacaagaggaatatgaggaggtccttcagtatcaag
gagagcagtatctggaggatgtgtgtaacgacgggggcgggtgaggagggtctgggccga
cagactggcgatagcagcccccagacggaggacaaagaacccagtgtggagcgagggagg
aagggaggaggggatggacacagttaccttcagagtacagacaagcctgcaccttttaac
ggacagtgtctgaacggccatggcaggacagagggggagaggcaggctaagaacggccat
gctgcaaggacagagggggagggagggaggcaggccgcctccaggaacagccacataaca
gcctacagtgaggaaagctcaacatgtgagcagcagccccagtcccctggaggtctaacc
ctggcccccctgcactcggcccccctgtgcctggcagaccccctggcagtgaccaactac
acagagacagaacaaactgggaacaacaaccacctcaagttggcaatcccagaggtgaat
gaggacagaggttgggacacagagaggagaggacatggtcttcagggacagacagtctgc
aagaggacccgctccaactctaccagtgtccatccatactggattggagacctggacacc
attatcctgaagacgcctgagctttgcgggagcaacacccacggaaccgtcggtttcttt
ggcagcaggaagtcccagtcccagcagctggagtttcctcacaaccccaaccagcccgtt
ccccgtccctctcgctctcttagctccgcccatctggtccactcctgcagtaacgtccaa
gccttcatcatctgtaacatcgtgctgatgaagggccatggcaagggtctggggttcagc
attgtggggggcagggacagcatgtacggacccatgggtatctacgtcaagaccatcttc
gctggaggggccgcggctgccgatggcagactacaggagggggatgagatcctggagttg
aatggagagtctctacatggactaactcatgaggatgcactacagagattcaaacagata
aagaagggtctgttgactctggtggtgaggaccagcctgcgtgtcggcgccctctgtggc
caggcagcggtagcacagctgtgtcggtctcgctctctcagctccagtactggcatgtcc
agggtcagcactgaaatgggggactacaattacctcagtgatgtcgccacagccaacaca
cacaccaacaccgtacctcagccacctttggccaaaccccgagatcgtgtcatgatggag
atcaccttgcataaagaggccggtgtggggctgggcattgggctgtgttgcgtgccgtct
ggagatggttgccgtggcatctatatccacaccctgtcccctgggtcggtggcacacatg
gacagtagactcagatgtggagatgagattatggagatcaacaacacagtggtgtacaac
atggtactgaatgatgtgtacacggttctgagtcagtgctcccccgggccagtccagatc
atcatcagtcgacaccctgaccccaaagtgtcagagcagcagctgaacgatgccatagcc
caggctgtagagaccagccaactaaagcaggacgccagcctgcgtaggtctgacccctgc
tcccactccagagggaagtgtgagcgctgtgtggcgaggagcttcagccaactgactgcc
cggcgagcccagaagaacatgacccgctcctgtagtgacagcaacacatacaaccagaac
caccatcataaccatcagcacaaccgctgccccggaccaggaaccaacctggttaatggt
caaaccctgactatacccaaccacaacatgcaccataatctgatggaaagggtccacagc
ctcgacatccccatggggtccacgcctgagccctggtgtgataacagactgtctgcattg
gtctaccctatccctgatgacgactataacgtcccctacaactccccagcagccaacctc
tcctgccagcgcacgttagacctggccacaaggggaaataagaacaggcccaaagccctg
gcacctccaaggaggtactgccgacaccaggacgtcactagtgaggagggggcccctggg
ggcctgccagactccaatgtttccagtagaggctcccctgttagagaggacggatggagt
cccacacataccaactgtcaggaagtagagagtgagagagaaagagagagagaaagagag
cgagaacactcacggggaagtggagagactctcacccactcagaggctcgctctgctgcc
atcaccgactgccctcgatactcatcctgcacagaagacagactacacacaggtgctgaa
tctgccttccacctctgctcccagagtaagaggccgggcctgaggaggcagggccgcgtg
gagcagctccccccagaaaagcttcacgacccctgggttaggatctccgacagcgcccct
gatcttggaggtcctgaagacccccatcagaaccagagtctgactcatccgagcacacac
cgtcacaacacacactcccacagtagcacacaccaacaacaagcacaccatctcagctca
caccacgacgccacacacactccatcccaaaccgacagacaccccaacgacacacactcc
ccagtcgccatgagccaaccgagtgagtttcccgagcttcctgaattcaactgtacttcc
acccaccacaccgccccagaccccaccaccccctccacccctgcctccctaatctccacc
cccagcccaaggactgaggaccccccaggggtgaggaagggccccccagttgcccccaag
cctgtgtggaaccgtcagagcctcaggagtattaggaatgggaggccccaggctgagctg
gccaaacccctggacatcagaggcggtggaaccaccttcggggtacgtctgcggcccacc
tcctctacagcccagctgtcaatcaagcagaagatccattcatttgagaccttctctagt
cctgagggtaaaggtcaggagatggagggcaacaacaggaggcccctagccccctccact
tccctccctctgaaggacaaggcactcgtcaggagtgacccccctctcttagaggagaat
ggcacaatccaacatgacatgggcaaaggagccaaagtgacctctccaatccctgacgag
gacaaggacaggaggatgtcctcttttccccctggagcctctcctcactccatccttccg
ccctctcctgcctcccacccttctcctcctacctgtttttctcttcttccgaccccccac
cctacctcggagctccagaccccagtggaagagacaacagaccccaatgcagagatctct
gactcgccatcccccgatgacaccaccacctccccatccaccctagaggcacctctcccc
gaggccgaaccagaaacagagcccctggatggggctgtagaggcctccatctccccctcg
ggcccggtgcccaggaggtccagcagctccaagggagagagctttggtccactacaacca
ccagaggaggaggagggagaccagaaccatgcccaggctcagggcaagcaggccagcctg
cggacgcgtagcctgcccctgcctacctctccctccccggatgggtcaacaactctacaa
ggactggagggagagagcctggggaagatactttccttcagtaaccaggtttcccatgcc
ctgatgcgttccatgcactccctgctcccctccctctatcctactaggccgggtaacccc
gggtcagacccaccccttgtatcccctctagtctgcagcccggaggagcccgaccaagtc
cagaacactcccctctcccctggccccgacagcaatgagaatagcttctctgtcagccta
tctgatctgaggcagtgtaccattgagcggggggaggagggaggggacctggtctcacgc
ccatctccgtcagcatgtgcccactctgttatctcagccatccctccacaggaaatacag
accatgatccaggaagtgaaagctctggatgaggaaacactgaagcaatttgagcacatc
caagtggtgattctgcacaaggaggaaggagcaggtctgggtttcagcattgcaggtggg
atagacctggagagcaaggctaccacagtgcatcgtgttttcccccacggcctggcggct
caagaggggaccgtggagaagggtgacgaggtgctgtccatcaacggccagacactaagg
ggtgcgacacacgcggacgccaccgccacgctgcgccaggcccgcaccatgagactggcc
gtggtggtggtaagcaaggggagagagggaggaggagggaacaagactgatgattactct
gtcagcagtagcagtacagacctcaaccccacaggtgagtag
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integrated database retrieval system
