Oncorhynchus mykiss (rainbow trout): 110527018
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Entry
110527018 CDS
T07259
Name
(RefSeq) sodium/potassium/calcium exchanger 1-like isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
110527018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110527018
Transporters [BR:
omy02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
110527018
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
110527018
NCBI-ProteinID:
XP_036819986
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Position
26:complement(7002295..7039738)
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AA seq
748 aa
AA seq
DB search
MHLPQRRRLNRSRILFFLSGVLLCCVYTVTFKARLQEPRVARQAAAEEDPGTALPVEGGG
SDSSSVLEVDTREVVTSNLSSLTESYDDDVITRAPTVLEGDDVIVITVNRTDIKHCIYVE
DPEPEPPTEPPPTSPPPNTTTSPGIPGDVPHRKGEYPEDLFTVDQRRQGWVTLHILGMVY
MFVSLAIVCDEFFVPALGVITVKLDISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVG
IGTIVGSAVFNILFVIGMCAIFSREMLHLTWWPLFRDVSFYIIDLIMLIVFFLDNTIMWW
ESVMLVSGYVAYVCFMKFNVQIEHFVKTQINKHKSIVKIIMPEEEEEKEPKKQNSGHPPP
DPPQNNVSPEPKPLPQDSPQKRDREKLKVKPTLQRGGSNASLHNSTNRNTIFQLMIHTLD
PLGEETGFSRDVRGPGQRRVRQETTTFNGEVRTEVSVQRKAGPEKTEQAEPSTSQTTPKE
EEKQGLSETQTDQGPAGAGGSDGSDSGEEDESEEESEDEEDEDDEDEEDDEENKEEEEGE
ENEEPLSLEWPDTRRKQATYLFLLPIVFPLWLTVPDVRNPASRKYFAMTFIGSITWIAVF
SYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNI
FDITMGLPVPWLIFSAMQGGVPVAVNSNGLFCAIVLLFVMLLFVIVSIAACRWKMSRVLG
LTMFMLYFVFLVLSVMLEDRIIICPVSI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgccacaaagacggagactcaatcggagtcgcatcctcttcttcctctctggt
gtattactgtgctgcgtctacaccgtgacgttcaaggcccggctgcaggagccacgggtg
gcccgccaggccgctgcagaggaggaccctgggacagcactcccggtggaagggggcggt
agtgatagtagtagtgttctggaggtagacacacgagaggtggtgacctctaacctctct
agcctaacagagagctatgatgatgacgtcatcaccagggctcctactgtgctggagggg
gatgacgtcatcgtgataactgtcaacaggactgacattaagcactgtatctacgtagag
gaccctgaacctgagcctccgactgaacctcctcccacctcccctcctcctaacaccacc
acctccccgggtatccctggagatgtcccccacaggaagggagagtacccagaggacctg
ttcacagtggaccagaggaggcagggctgggtgaccctccacatcctgggcatggtctac
atgttcgtctccctcgccatcgtctgtgacgagttcttcgtcccggcgctcggcgtcatc
accgtgaagctcgacatctccgacgacgtcgccggggcaaccttcatggctgcaggaggc
tccgcccccgaactgttcacctctctgattggcgtgttcatctcccatagcaacgtgggc
atcgggacaatcgtggggtcagcggtgtttaacatcctgtttgtcatcgggatgtgtgcc
atcttctccagggagatgctccacctcacctggtggcccctgttcagagacgtctccttc
tacatcatagatctgatcatgctgatcgtgttcttcttggacaacaccatcatgtggtgg
gagagcgtaatgctggtgtcaggttacgtggcctacgtctgcttcatgaagttcaacgtg
cagatcgaacacttcgtcaagacgcagatcaacaaacacaagagcatcgtcaagatcatc
atgccagaggaggaggaggagaaggaacccaagaagcagaacagtggacatccaccacct
gatccacctcaaaacaatgtttcaccagaacccaaaccactacctcaagactcaccccag
aagagagacagagaaaaactgaaggtgaagcccactctccagagaggaggcagtaatgcg
tctctccacaacagcaccaacagaaacaccatcttccagctgatgatccacacactggac
ccactgggagaagagacgggatttagcagagatgttagaggccctggtcagaggagagtt
agacaagaaacaacaacctttaatggggaggtcaggacagaggtgtcggtgcagaggaaa
gctggacctgagaagactgagcaggctgaaccctcgacctcccagaccacacctaaagaa
gaggagaaacaaggcctgtcagagactcagacggaccaggggccagcgggcgcagggggg
tccgacggctcagacagcggtgaggaggacgagagtgaagaagagagcgaggatgaggaa
gacgaggatgatgaagacgaagaggacgatgaggaaaataaagaggaggaagagggtgaa
gagaacgaggaacctctgtcgttagaatggccagacaccagacgtaaacaggccacatat
ctttttctcctaccgatagtgttccctctgtggctcactgtgcccgacgtacgcaacccg
gcttccagaaaatactttgccatgacgtttattggttccatcacgtggatcgctgtgttc
tcctatctaatggtctggtgggcacatcaggtgggtgaaaccataggcatctcagaggag
atcatgggcctgaccatcctggcagcgggcacctccatccctgacctcatcactagtgtc
atcgtggcccggaaaggactgggagacatggctgtgtccagctcagtgggatccaacatc
ttcgatatcactatgggcctgcctgtcccatggttgatcttctcggcgatgcaaggcggc
gtaccggtggcggtgaactccaacggtctgttctgtgccatcgtgctcctcttcgtcatg
ctcctcttcgtcatcgtcagcatcgcggcgtgtcggtggaagatgagccgcgttctgggc
ctcaccatgttcatgctttacttcgtgtttctggtgctcagcgtgatgctggaagaccgt
attattatctgccccgtctccatctga
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