Oncorhynchus mykiss (rainbow trout): 110527135
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Entry
110527135 CDS
T07259
Name
(RefSeq) homeobox protein Hox-C13a
KO
K09298
homeobox protein HoxA/B/C/D13
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110527135
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
110527135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HoxA13_N
Homeodomain
Homeobox_KN
Homez
Motif
Other DBs
NCBI-GeneID:
110527135
NCBI-ProteinID:
XP_021463959
LinkDB
All DBs
Position
7:63538890..63544471
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AA seq
306 aa
AA seq
DB search
MTTSLVLHPRWADTLMYVYEKSPNENNQNKNQSMEGLGGNCPATHCRELISHSALGRHSG
SLSHQGSVYSEIPSQDTGRHCPATQTSSSATLGYGYPFGSPYYGCRLSHSHNVNLQQKPC
SYHPAEKYTEPSAALPTEELSGRAKEFAFYPSFASSYQTVPGYLDVSVVPGISAHPEPRH
DTLIPMDGYQHWALSNGWDGQVYCSKEQTQSTHLWKSPFPDVVPLQPEVSSYRRGRKKRV
PYTKIQLKELEKEYAGSKFITKDKRRRISATSNLSERQVTIWFQNRRVKEKKCVCKSKSS
SHMHAT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgacgacttcgctggttctgcatccacgctgggcggacaccttaatgtacgtatatgaa
aaaagcccgaatgaaaataatcagaataaaaaccaatcaatggagggactaggcgggaat
tgtcctgctactcactgcagggaactgatctcgcactcagcgttgggacgacactccggc
agcctaagccaccagggttctgtgtactcggaaataccctcccaggacacagggcgacat
tgccccgctacccagacttcctcaagcgccaccctgggttatggctacccgttcggaagc
ccttattacggttgtcgattgtcacactcgcacaacgttaacttgcagcagaagccatgc
tcttaccaccctgccgagaagtatacagaaccaagcgcggcactgcccacggaagagctg
tcaggcagggcaaaggagttcgccttttacccgagttttgccagttcataccagactgtc
ccaggttacttggacgtgtctgtggttcccggtatcagtgcgcacccggaaccgagacat
gatactttgattcccatggatggatatcagcattgggctctatctaatggctgggacgga
caggtgtactgttctaaagagcaaacacagtcaacacatctctggaaatctccattccca
gatgtcgtccctttgcagccagaggtcagcagctacagacgaggccgcaaaaagagagtt
ccttacaccaagatccagctgaaggaactagagaaagagtacgcaggcagcaagttcatc
accaaagacaagagacgtcgaatatctgccacttctaatctctctgaacgccaggtcacc
atctggttccagaaccggcgggtgaaggagaaaaaatgtgtctgtaaatctaaatcaagc
tctcacatgcatgccacttga
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