Oncorhynchus mykiss (rainbow trout): 110527229
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Entry
110527229 CDS
T07259
Name
(RefSeq) tubulin alpha chain isoform X1
KO
K07374
tubulin alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145
Phagosome
omy04210
Apoptosis
omy04530
Tight junction
omy04540
Gap junction
omy04814
Motor proteins
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110527229
09143 Cell growth and death
04210 Apoptosis
110527229
09144 Cellular community - eukaryotes
04530 Tight junction
110527229
04540 Gap junction
110527229
09142 Cell motility
04814 Motor proteins
110527229
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110527229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110527229
03036 Chromosome and associated proteins [BR:
omy03036
]
110527229
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110527229
04147 Exosome [BR:
omy04147
]
110527229
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110527229
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
110527229
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
110527229
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110527229
Exosomal proteins of other body fluids (saliva and urine)
110527229
Exosomal proteins of colorectal cancer cells
110527229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
110527229
NCBI-ProteinID:
XP_036807242
Ensembl:
ENSOMYG00000009711
UniProt:
A0A8C7P2K3
LinkDB
All DBs
Position
18:12390243..12404033
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGTMPNNKAVGSTDDSFTTFFSATGIGK
YVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDQVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIGNIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSFEEDEEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctctgtgcatgtgggtcaggctggagtccagatgggcaacacctgt
tgggagctgtactgcctggagcacgggatccagccggacggcaccatgcctaacaacaag
gcggtcggtagcactgacgactccttcaccacgttcttcagcgccacgggcatcgggaaa
tacgtaccccgcgccatctttgtagacctggagcccactgtcattgatgaggtgcggaca
ggtacctaccgccagctgtttcaccccgagcagctgatctcagggaaggaggacgcagcc
aataactatgcccgtggccactacactatcggcaaggagatcatcgaccaagtgctggac
aggatccgtaaactggctgaccagtgtacggggctccaaggtttcttggtcttccacagc
ttcggaggaggtaccggttctggtttcacctccctgctcatggagcgtctctcagtcgac
ttcgggaagaagtccaagctggagtttgccatataccctgctccccaggtgtccacagct
gtggtggagccctacaactccatcctgaccacccacaccaccctagagcactctgactgt
gccttcatggtcgacaatgaggccatctacgacatctgccgtagaaacctggacattgag
cgcccctcttacaccaacctcaacaggctcatcagccagattgtctcttccatcacagcc
tctctccgcttcgatggtgcccttaacgtggacctgacagagtttcagaccaacctggtg
ccttacccccgcatccactttcccctggccacctatgcccctgtcatctcagccgagaag
gcctaccacgagcagctttctgtggctgagatcaccaactcctgcttcgagcccgccaac
cagatggtaaagtgcgaccctcgccacggtaagtacatggcgtgctgcctgctgtaccgc
ggagacgtggtgcccaaggatgtcaacgtggccatcggcaacatcaagacaaagcgaagc
atccagttcgtggactggtgccctacaggtttcaaagtgggcatcaactaccagccaccc
actgtggtgccagggggtgacctggccaaggtccagagagctgtgtgcatgttgagcaac
accacagccatcgctgaggcctgggcgcgtcttgaccacaagtttgacctgatgtatgcc
aagcgggcattcgtgcactggtacgtgggtgagggcatggaggagggagagttctctgag
gccagggaagacatggctgccctggagaaggactatgaagaggtcggaatcgactcattt
gaggaggacgaggagggagaggagtattag
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