KEGG   Oncorhynchus mykiss (rainbow trout): 110527293
Entry
110527293         CDS       T07259                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X2
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110527293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110527293
Spliceosome [BR:omy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110527293
 Complex B
    110527293
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_2
Other DBs
NCBI-GeneID: 110527293
NCBI-ProteinID: XP_021464150
Ensembl: ENSOMYG00000001552
LinkDB
Position
7:complement(7802875..7815412)
AA seq 173 aa
MQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNR
WFNGQPVHSELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRDLYGRRRKGK
GGGGGGGGHRSRSRSRERRSRSRDRGRGGDGGRGGGRDREKRRSRDRERSGRF
NT seq 522 nt   +upstreamnt  +downstreamnt
atgcaagagcactatgacgagttctttgaggaagtcttcacagagatggaggagaagtac
ggagaggtggaggagatgaacgtgtgtgacaaccttggcgaccacctggtcggcaacgtc
tatgtgaagttccgtcgggaagaggatgcggagaaagcggtgatggacctgaacaaccgc
tggttcaacggtcagcctgtccactcagagctctcccccgtcactgacttcagggaagcc
tgctgtcggcagtatgagatgggagagtgcaccagaggaggcttctgcaacttcatgcac
ctgaagcccatctccagggaacttcgtcgggacctgtatggacgccgcagaaaaggcaaa
ggaggaggaggaggaggaggaggacaccgctctcgctcgcgatcccgggaaaggcgttct
cgctcccgagaccgtggccgtggtggcgatggtggaagaggtggcggacgagaccgcgag
aaacggaggtccagggaccgggaacgttctggaaggttttaa

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