KEGG   Oncorhynchus mykiss (rainbow trout): 110527295
Entry
110527295         CDS       T07259                                 
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110527295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110527295
Spliceosome [BR:omy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110527295
 Complex B
    110527295
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 110527295
NCBI-ProteinID: XP_036807579
Ensembl: ENSOMYG00000001839
UniProt: A0A8C7LWJ0
LinkDB
Position
18:complement(9007457..9020620)
AA seq 279 aa
MQTTMTKSTAFASVKKSGKCRIHDVEHHLVDKPKMAEYLASIFGTEKDKVNCSFYFKIGA
CRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQSADGIRCAVSDVEMQEHYDEFFEEVF
TEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVMDLNNRWFNGQPVHSELSP
VTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRDLYGRRRKGKGGGGGGGHRSRSR
SRERRSRSRDRGRGGDGGRGGGRDREKRRSRDRERSGRF
NT seq 840 nt   +upstreamnt  +downstreamnt
atgcaaacgacaatgacgaagagcacagcttttgcctctgtcaaaaaaagcggcaagtgt
cgaatacatgacgtagagcaccatttagttgacaaaccgaagatggcggagtacctggcc
tccattttcggaacagagaaagacaaggtcaattgttcattctactttaaaattggagcg
tgcagacatggggaccgctgctctaggttgcacaacaagccaactttcagccagaccatt
gccctgttgaacatttaccgtaaccctcaaaacactgcccagtctgccgatggtatacgc
tgtgccgtcagcgatgtggaaatgcaagagcactatgacgagttctttgaggaagtcttc
acagagatggaggagaagtacggagaggtggaggagatgaacgtgtgtgacaaccttggc
gaccacctggtcggcaacgtctatgtgaagttccgtcgggaagaggatgcggagaaagcg
gtgatggacctgaacaaccgctggttcaacggtcagcctgtccactcagagctctccccc
gtcactgacttcagggaagcctgctgtcggcagtatgagatgggagagtgcaccagagga
ggcttctgcaacttcatgcacctgaaacccatctccagggaacttcgtcgggacctgtat
ggacgccgcagaaaaggcaaaggaggaggaggaggaggaggacaccgctctcgctcgcga
tcccgggaaaggcgttctcgctcccgagaccgtggccgtggtggcgatggtggaagaggt
ggcggacgagaccgcgagaaacggaggtccagggaccgggaacgttctggaaggttttaa

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