Oncorhynchus mykiss (rainbow trout): 110527339
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Entry
110527339 CDS
T07259
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110527339
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110527339
Enzymes [BR:
omy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110527339
Peptidases and inhibitors [BR:
omy01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110527339
Ubiquitin system [BR:
omy04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110527339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
110527339
NCBI-ProteinID:
XP_021464225
Ensembl:
ENSOMYG00000005979
LinkDB
All DBs
Position
7:complement(13486513..13510689)
Genome browser
AA seq
2595 aa
AA seq
DB search
MTVTTRGSPVGGNDSQGQAPADSQSQPPPTQAQAVSPNPSTTEPSPVSPPAAEEEQGQGD
SAPALEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEA
CQRFFRDGLTISFTKILTDEAVSGWKFEIHRCIITNTHRLVELCVTKLPQDWFPLLELLA
TATNPHCKFHIYNGTRPSETIPAGATLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQ
TLHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELK
KEAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNAL
NEVNKVIASVAYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEK
ILRFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKES
WTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKI
LDYSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPH
VFYRHDLINQLQHNHALVTLVAENLSAYMETMRPFSKAEHADFDPQTVRVGSRYSHVQEV
QERLNFLRFLLKDGQLWLCAPQAKQIWRCLAESAVFLCDREACFKWYSKLMGDEPDLDPD
INKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYL
WRVVIQGTDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQLCFDRLKASYDTLCVLD
GDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERSILPMSRAFRGKHITLIVRFPN
QGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGEVVDPADDRKLIGQLN
LKDKALITAKLTQVSATVPSSPDSSSDSSTASPSNHGNHFSEGPNPEVEGCLPGVIMSLH
LRYISFLWQVADLGCTLNMPLLRDGARLLMKLMPPDNGTVENLRAICLDHAKLGENSLSP
TLDSRFFGPSPSQVLYLTEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVLSMLTRNN
FLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPVVEGTSPASPINQVTHDQ
ALVLQSALQNIPNPASECMLRNVAIRLAQQISDESLPPNSQNFFQASKYIPDLCVIRAVQ
KIVWASGCGTVQLVFSSNEEISQIYEKTNAGNEPDGEDEMVCCEALEIMTLCFALLPTAL
DTLSKEKAWQTYIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGS
TAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEALLNNEIDWLKKIRDEVKRTGETGVE
ETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASIVYLQYVKSGEF
PTEQAIPVCSSPASINAGFELLVALPVGCVRNLRQIVDTLTDMYYLGCEALTEWEYLPPV
GPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGVLAVEGTGTDVDDELSGDEKQENE
TNADGTVRDEVFPYQHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYVPRG
FWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKAMGHSSMLSKVLGGSFADQKICRD
CPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLI
KKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDGNPESQM
IMQNEPSEPDPPGCSSKYRLVGVLVHSGQASGGHYYSYISQRDGVTGGSADSGQKERWYK
FDDGDVTECKMDDDEEMKSQCFGGEYMGEVFDHMMKKMSYRRQKRWWNAYILFYERMDAA
GGGAAVEADGELARCISELTVSPTTPRQVTMPGAIECSVRKQNVQFMHSRMQYSLEYFQF
VKKLLTCNSVYLNPPPGQDHLLPEAEEIAMISIQLAARFLFSTGFHTKKIVRGPAGDWYD
ALCILLRHSKNVRCWFAHNVLFAYPTRFSEYLLECPSAEVRGAFAKLIVFIAHFSLADGP
CPVPTSSPEGSTQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQFFNLFVMYANLGLAE
KTQLLKLSVPATFMLVALDEGPGPPIKYQYAELTKLYAVVSQLLRCCDVSTRMQSSINGN
PSLANPYGDANLTTPIMPLQQLVSEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQ
FSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDT
IQRSKNHYQKRAYQCIKCMVALFSNCTVAYQILQSNGDLKRKWTWAVEWLGDELERRPYT
GNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEVRKEPDDQEATEDHD
SSPPEDTALYPHNPAPATQFQQQNNHPHAQPYTGPAAQHMNTPQRPPQRAQESWESTTEE
VGPVAPPPAVQTTKE
NT seq
7788 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcaccacacgtggctcccccgtggggggaaatgatagccagggccaggcaccc
gctgattctcagagccagcccccacccacacaggcccaggcggtgtcccccaacccgtcg
accacggagccgtctcctgtgagcccaccggcggcggaggaggagcagggccaaggagac
tctgcccctgctctggaggaggaggagcctgccttccctcacactgacctggccaagctg
gacgacatgatcaacaggccccgatgggtagtcccagtcctgccaaagggggaattagaa
gttctacttgaagctgctatagacttatgtaaaaaagggcttgatgtgaagtgtgaggcg
tgccagaggtttttcagggacggcctgaccatctccttcactaagatcctcacagacgag
gctgtcagtgggtggaagtttgagatccataggtgtatcatcaccaacacacaccggctg
gtggagctgtgtgtgaccaagcttcctcaggactggttccccttactggagctactggcc
acagccaccaacccccactgcaagttccacatctacaacggcacgcggccttctgagacc
atccccgccggggcaacgctggccgacgacgagctcttcgcccgcccacctgaccctcgc
tcacccaagggctggttggtggacctgattaataagtttggcacgctgaacgggtttcag
actctacacgaccgcttcatgagcggacaggcactcaacgtgcagatcatcgccgccctc
atcaagccgttcggccagtgctatgagttcctgaccttgcacacagtgaagaagtacttc
ctgccagtgatcgagatggttcctcagttcctggagaacctgacggacgaggagctgaag
aaggaggccaagaacgaggccaagaacgatgccctgtccatgatcatcaagtccctgaag
aacctggcctccagggtgcccggtcaggaggagaccgtcaagaacttggagatatttagg
ttgaaaatgatccttaggttattgcagatttcctcattcaacggcaagatgaatgccctg
aacgaggtcaacaaggtaatcgccagtgtggcctactacacgcatcggcatggcaacccg
gaggaggaggagtggctgacggcagaacgcatggcggagtggatccagcagaaccacatc
ctgtccatcgtgctgagggacagcctccaccagcctcagtacgtagagaaactagagaag
atactccgcttcgtcatcaaggagaaagccctcaccatgcaggacctggacaacatctgg
gcagcgcaggctggtaagcacgaagccatagtgaagaatgtccatgaccttctggccaaa
ctggcctgggacttctctccagagcagctcgaccatctctttgattgcttcaaggagagt
tggacgaatgcgagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctggcg
gaggacgataaggatggagtgatggcccacaaggtgctcaacctgctgtggaacctggct
cacagtgacgacgtccccgtggacatcatggaccaggccctcagcgcacacatcaagata
ctggactacagctgctctcaggacagagacacccagaagatccagtggatagaccgcttc
atcgaggagctgcgcaccaacgacaagtgggtcataccagccctgaagcagatcagagag
atctgcagcctgtttggggaagctcctcagaacctcagtcagacccagaggagtcctcat
gtgttctatcgtcatgacctgatcaaccagctgcagcacaaccatgccctggtcactctg
gtggctgagaacctgtctgcctacatggagaccatgagaccgttctccaaagctgaacac
gcagactttgaccctcagacggtcagagtgggaagtcgctacagtcatgttcaggaggtc
caggagaggctcaacttcctgaggttcctgttgaaggacggacagttgtggctatgtgct
cctcaggccaagcagatctggaggtgtctggctgagagcgctgtcttcctgtgtgaccgg
gaggcgtgcttcaaatggtactctaagttaatgggagatgagccagacctggacccggac
atcaacaaggacttctttgagaacaatgttctgcagctggacccgtccctgctcacggag
aacggcatgaagtgcttcgagaggttcttcaaggctgtcaactgccgcgagggcaaactg
gtggccaaacgcagggcctacatgatggatgacctggagctcataggactggactacctc
tggagggtggtgatccagggtactgatgacatcgccagccgagccatcgacctgctgaag
gagatctacaccaacctggggcccaagctgcaggtcaaccaggtggagatccacgaggac
ttcatccagttgtgttttgaccgtctgaaggcgtcgtatgacacgctgtgtgtcctggac
ggggacaaggacagcatcaactgtgcccggcaggaggccatccgcatggttcgcgtgctc
accgtgctcaaagagtacatcaatgagtgtgacagcgactaccacgaggagaggtccata
ctgcccatgtccagggcgttccgggggaagcacatcacgttgatcgtgcgtttccctaac
cagggtcgtcaggtggatgacctggacatctggtctcacaccaatgacaccatcggctcg
gtgcgccgcggcatcctcacacgcattaaggccaacgccacgcacaccaagatagagctc
ttcattggcggggaggttgtcgacccggcggatgacaggaagctgattggacagctcaac
ctcaaggacaaagcattgatcacagccaagctgacccaggtgagtgccaccgtgccctcc
agtcctgacagctcctcagactcctccactgcctcgcccagtaaccacggcaaccacttc
agcgaaggacccaacccagaggtggagggctgcctgcctggagtgatcatgtctctccac
ctgcgctacatctcgttcctgtggcaggtagcagacctgggttgtaccctcaacatgcct
ctgctgcgagatggagccaggcttctcatgaagcttatgcctccagacaacggtaccgtg
gagaacctgcgcgctatctgtctggatcatgccaaactgggagagaacagcctgagcccc
acactggactcccgcttctttggcccctcgccctcacaagtcctctacctcactgaggtg
gtgtatgcgttgctgatgccggccagcggcaccctcggggaggacgccagcgacttccag
tacaacttcctgaagagcggcggcctcccgctcgtattgagcatgctcaccaggaacaac
ttcctgccatcggccgacatggagacgcggcggggggcgtacctcaatgccctgaagatc
gccaagctgctgctgaccgccgtggggttcggacacgtcaaagctgtggccgaggcctgc
cagcccgtagtggaggggaccagccccgcatcaccaatcaaccaggtgacccacgaccag
gccctagtcctccagagtgctctacagaatatcccgaaccccgcctctgagtgcatgctc
cgtaacgtggccatacgactggcccaacagatctctgacgagtctctgcccccgaactcc
cagaacttcttccaagcatccaagtacatcccagacctctgtgtgatccgggcggtgcag
aagatcgtgtgggcttcaggctgtggcacggtacagctggtcttcagctctaatgaagag
atcagtcagatctatgagaagacgaacgcgggtaatgagccggacggggaggatgagatg
gtgtgctgtgaggcactggagatcatgaccctgtgttttgccctgctgcccaccgctctg
gacacactcagtaaggagaaggcctggcagacttacatcatagacctgctactgcactgc
cacagcaagtcagttcgtcagatggctcaggagcagttcttcctcatggccactaggtgc
tgtatgggacacagacccctcctattcttcatcaccctcctcttcaccgttttagggagc
acggcaaaggagagggcgaagcacgcaggggactactttacgctgctgaggcacctgctg
aactacgcctacaacagcaacatcaacctgcccaacgctgaggcgctgctcaataacgag
atcgactggctcaagaagatcagggatgaggtgaagcggacaggagagacgggggtggag
gagaccattctagaaggtcacctgggggtcaccaaggagctgctggccttccagacacca
gagaagaagtactacattggctgtgagaagggtggggccaacctcataaaggagttgata
gatgacttcatcttcccggcgtctatcgtatacctgcagtacgtgaagagtggggagttc
cctacagagcaggccatccctgtctgtagcagccccgcctccatcaacgccggcttcgag
ttgctggtggctctgccggtcggctgtgtccggaatctcaggcagatcgttgatacactc
acagatatgtactacctaggttgtgaggctctgacagagtgggaatatctccccccagtg
gggccgcggcccaccaaaggctttgtggggctgaagaacgcgggggccacctgctacatg
aactcggtcatccagcagctctacatgatcccgcccatccgtaacggtgtcctggccgtg
gagggcaccggcaccgacgtggacgatgaactgtccggggacgagaagcaggagaacgag
actaatgccgacggaacggtgcgggacgaggtgttcccctaccaacaccagtttgacgac
aagccctcgctgagtaagtcggaagacaggaaggagtacaacattggggtgctacgccac
ctacaggtcatctttggtcacctggcctcctcccgactgcagtactacgtaccccgaggc
ttctggaaacagttcaggttatggggtgagccggtgaatctgcgagagcagcacgatgcc
ctggagttcttcaactctttagtggacagtctggatgaggctctgaaggccatgggccac
tcctccatgctgagcaaggtgctgggaggctcctttgccgaccagaaaatctgccgtgac
tgcccacacaggtatgaatgtgaggagtccttcaccacgttgaacgtggacatcaggaac
caccagaacctgctggactctatggagcagtacgtcaaaggagacctgctggagggagcc
aacgcataccactgtgagaagtgtaacaagaaggtggatacagtgaagcgtctgctgata
aagaagcttcctccagtgctggccatccagctgaaaaggtttgactacgactgggagagg
gagtgtgccatcaagttcaacgactactttgagttccccagggagctggacatggagccc
tacactgtagccggggtggcaaagctggagggtgatgacggcaacccggagagccagatg
atcatgcagaacgaaccatcggaacccgacccgccaggctgcagttctaagtaccgcctg
gtgggggtgctggtgcattcgggccaggccagcggcggccactactactcttatatcagc
cagcgagacggtgtcaccggcggttccgccgacagcgggcagaaggagcgctggtacaag
tttgacgacggtgacgtgacggagtgcaagatggacgacgacgaggagatgaagagccag
tgcttcgggggggagtacatgggagaggtgtttgaccacatgatgaagaagatgtcctac
aggaggcagaagagatggtggaatgcctacatcctgttctatgagaggatggacgcggca
gggggaggggccgcagtggaggcagacggagagctggccaggtgcatctcagagctgact
gtgtctcccactacaccacgacaggtgacgatgccgggggccattgaatgcagtgtgagg
aagcagaatgtccagttcatgcacagccgcatgcagtacagcttggagtacttccagttc
gtcaagaagctgctgacctgcaacagcgtctacctcaaccctcccccgggtcaggaccac
ctgctgccagaggcagaggagatagccatgatcagcatccagctagcagctaggttcctc
ttcagcaccgggttccacaccaagaaaatagtccgggggcccgccggtgactggtatgac
gccctgtgcatcctgctgcgccacagtaagaacgtccgctgctggtttgcccacaacgtt
ctgtttgcgtaccccacgcgcttctctgagtacctgctggagtgtcccagtgccgaggtc
cggggggccttcgccaaactcatcgtcttcatcgcccacttctccctggcggacgggcca
tgccccgtccccaccagctcccctgaggggtccacacagggctgtgataacctgagtctg
agtgatcacctgttgagggctgtgttgaacctgctcaggagagaggtgtcagagcacggc
cgacacctgcagcagttcttcaacctcttcgtcatgtacgccaacctgggtctggcagag
aagacccagttgttgaagctgagtgtccctgctaccttcatgctggtggctctagacgag
gggcctggccctcccataaagtaccagtatgcagaactgaccaagctctacgctgtggtc
tcccagctactgcgctgctgtgacgtctccacacgcatgcagtcctccatcaatggtaac
ccgtccctggccaacccgtacggagacgccaacctgaccacccccatcatgcccctgcaa
cagctggtgtcagagatcctcttcgttaggaccagctatgtgaagaagatcatcgaggac
tgcagcaactctgaggagacggtcaagctgctgcgcttcagctgctgggaaaacccccag
ttctcctctaccgtgctgtctgagctgctctggcaggtggcgtactcctacacgtatgag
ctgaggccttacctggacctgctgctgcagatactgctgatagaggactcctggcagacc
cacaggatccacaacgtgctgaagggtataccagacgacagggacggcctgtttgacacc
attcagcgctctaagaaccactaccagaaacgggcctaccagtgtatcaagtgcatggtg
gctctgttcagcaactgtactgtggcctaccagatactacagagtaacggggacctgaag
cgtaagtggacgtgggcggtggagtggctgggggacgagctggagaggaggccctacaca
gggaacccccagtacacctacaacaactggtctccccccgtccagagcaacgagacctcc
aacgggtacttcctggagcgctcacattccgcacgcatgaccctggccaaggcctgtgaa
ctttgccccgaggaggtacggaaggagccagatgatcaggaggcaacagaagatcacgac
tcctcccctcccgaggacacagcgctgtacccccataaccctgctcctgccacgcagttt
cagcagcagaacaaccacccccacgcccagccctatacgggtccggctgcccagcacatg
aacacgccccagcggcccccacagagagcacaggagagctgggagagcaccacagaggag
gtggggcccgtggcgcccccgcccgctgtacagacgacaaaagagtaa
DBGET
integrated database retrieval system
