Oncorhynchus mykiss (rainbow trout): 110527442
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Entry
110527442 CDS
T07259
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecules
omy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110527442
04517 IgSF CAM signaling
110527442
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRR_14
LRR_9
LapA_dom
Motif
Other DBs
NCBI-GeneID:
110527442
NCBI-ProteinID:
XP_021464386
Ensembl:
ENSOMYG00000046373
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Position
7:19183383..19192955
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AA seq
831 aa
AA seq
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MLPRILFLCSFFAAACFQDIQPSKVFLSESCDSLCTCEEKDGILYLNCEERNISKISQIK
VPSALPFHLNLYKNDLVELNAEDLEGLKNAVSLHLGANSIQELEPGVFSALGSLKKLHIN
SNFLVTLKEDTFHGLVNLEFLQADTNFIRVVEPGAFSKLIRLKVLILNDNAIEFLPSNIF
RFVPLTHLDLRGNQLQTLPYVGFLEHIGRIMELLLEDNDWMCDCEILHLKIWMENMRAQS
AIGEVVCSSPHHLRGTILAKIKRDVLCPSHADINLEEPSKSLDMVVTPSSKVAEIPKLEG
VVKIPTPSYVPGSPCVEHCSCHNHPVAGFLMHCQDRGIQRISDIGILEQSPTKLVLTGNM
IQRLLKYDFVTYDGLELLNLANNRIDYIDNETFLSLSNLKKLYLNGNRIETLSATMFIGL
HNLEYLYLEYNIIKEIVPGAFNPLPNLKLLSLNNNLLTSLPLQIFRNVPLTKLNLRKNLL
MHLPVSNVLDQLDSLEQIYLEDNPWDCSCDLISLKQWVEKLRKDTIIGSILCHTPRKVSK
AELRALRNELLCRGLVTYSLPTDEDETTTVATDGSRSGFFSSITDSVPLSVLILSLLVIF
LMVIFCSAGIVAFLVHRRRRRVKKKQAEEQPRESSSPIHLQYSMYGQKTTHHTLGQRTGS
TVYDERSHSPIVQICRNPTYCTQHKEYESDLNELDEPKHICRSIMETENTSPLTGSNLKF
RAVTSDCPTEFVTLGDASSLYKNILERERVRELQQLGITEYLRKNMSQLQPTVEMQVPGH
HEELKLMETIMLSRPRKVMVEQTKNEYFELKANLHTEPDYLEVLEHQTAFN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgctaccccgcatccttttcctttgctcatttttcgctgctgcttgtttccaagacatc
cagccctccaaggtatttctgagtgaatcctgtgactcattgtgtacttgtgaagaaaaa
gatggcatcctgtatcttaactgtgaggagagaaatatcagcaagatctcccaaatcaaa
gtgccgtcagctctacctttccacctcaatctgtacaaaaacgacttggtggagttgaat
gcagaagacttggaaggtttaaagaatgccgtttcacttcatctcggggctaatagcata
caagagcttgaacctggggtctttagtgcactgggctccttgaagaagctccacatcaac
agtaatttcctggtcacgttgaaggaagacacttttcacggcttggtaaatttggagttt
ctccaggcagacacaaacttcatccgcgtggtcgagccgggggctttcagcaaactcatc
cgcctcaaagttctgatcctcaacgacaacgccatcgagtttcttcccagcaatattttc
cggtttgttccgctcacccacttggacctacgggggaaccagttacagaccctgccttac
gttggcttcctggagcacattgggcggatcatggagcttcttctggaggacaacgactgg
atgtgcgattgtgagattcttcacctgaagatctggatggagaacatgcgggcccagtcg
gccattggggaggtggtctgcagcagcccccaccacctcaggggcaccatcctggccaaa
atcaaacgggatgttctctgcccctctcacgctgatatcaacttagaagagccttccaag
tcactggacatggtggtcactccgtcttccaaagtggcagagattccgaaattagagggt
gtcgtaaagattccgacaccttcttatgttccagggagtccttgtgtggagcactgttct
tgtcacaatcaccctgtggctgggtttttaatgcattgtcaggatagagggattcaacgg
atttcagatattggaatacttgagcaaagccctaccaagctggtgctcacaggaaacatg
attcagagactgttgaaatatgactttgtcacatatgacggtttagagttattgaattta
gccaacaatcgaattgattacattgacaatgaaacttttctcagcttaagcaatttgaaa
aaactttatctcaacggcaacagaattgaaaccctttccgcgaccatgttcattggactc
cacaaccttgaatacctatatttggaatataacattatcaaagaaattgttccaggagct
tttaatcctttgccaaatctcaaactcttgtctttgaataacaatctgctgactagtctc
ccattgcagatatttcgcaacgtgcccctcaccaaactgaacctgagaaaaaatctgctc
atgcacctgcctgtaagcaacgtgctggaccagcttgactctttagagcagatttattta
gaggacaacccctgggactgcagctgtgacttaatcagtctcaaacagtgggttgagaag
ctgaggaaggacacaatcataggttccattttgtgtcacacaccgagaaaagtgtcgaag
gctgagctgagggcccttagaaacgagttgctgtgccgaggcctagtgacctactccttg
cccacggatgaggacgagacaaccacagtggcgactgacggctctaggagtggtttcttc
agctcaatcacggactcagttccgctctccgttctgatccttagcttgctcgtcatcttc
ctcatggtcatcttctgttcagcagggattgtggcattcctcgtgcacagacggcgaagg
agggtgaagaagaaacaggcggaggagcagccgcgggagagcagcagccccatccacctg
caatacagtatgtacggccagaaaaccacccaccacacactggggcagaggaccggaagc
accgtgtacgatgagcgctcacacagccccatcgtccagatctgccgcaaccccacctac
tgcactcagcataaagaatatgagtccgacctcaatgaactggacgaaccaaagcacatc
tgtcgtagcatcatggagacagagaatacttcgcctcttacaggctctaatttgaagttc
agagctgtgacgtcagactgcccaactgagttcgtaacactcggcgatgcgagctccctc
tataaaaacatactagagagggagagggttagggagctgcagcagctcggaattactgaa
tacctcaggaaaaacatgtcccagctacaaccaacggtagagatgcaggttccaggacac
cacgaggaactgaaattaatggagactattatgttgtcgagaccgaggaaggtcatggtg
gaacaaacgaaaaacgagtactttgaactcaaagctaacctacacaccgagccagattat
ttggaggttctggagcatcaaactgcatttaactga
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