KEGG   Oncorhynchus mykiss (rainbow trout): 110527484
Entry
110527484         CDS       T07259                                 
Name
(RefSeq) desmin
  KO
K07610  desmin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04519  Cadherin signaling
omy04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    110527484
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110527484
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omy04812]
    110527484
Cytoskeleton proteins [BR:omy04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     110527484
SSDB
Motif
Pfam: Filament Filament_head DUF8429 ZK652 ANG-1 KIF21A_4th Mua DUF7491 COLEC12 TolA_bind_tri DUF1664 CCDC89 WXG100 DUF7432 GeBP-like_DBD
Other DBs
NCBI-GeneID: 110527484
NCBI-ProteinID: XP_036838824
UniProt: A0A8C7Q7X8
LinkDB
Position
7:21176983..21183344
AA seq 484 aa
MSSYRSSAQSAQSGSSSYRRTFGAGYSPAMSHSLYSSRGSGGGLGLGHGGSGHISSRVYE
VTKTSASPSYSGYRTSSHFGGPVMSSTAHGSRSYAGMGETLDFSLADALNQEFLHTRTNE
KVELQHLNDRFASYIEKVRFLEQQNATLVVEIERLRGREPTRIADLYEEEMRDLRRQVEA
LTNQRSRVEVERDNLGEDLDKLKLRLQEEILQREDAENNLAAFRADVDAATLARLDLERR
IETLQEEIAFLKKIHEEEIREMQSQMQETQVQIQMDMSKPDLTAALRDIRAQYEGIAAKN
ISEAEEWYKSKVTDLNQAVNKNNEALKEAKMETMEFRHQLQSYTCEIDSLKGTNESLMRQ
MREMEERHGREAGGFQDTISRLEAEIANMKDEMARHLREYQDLLNVKMALDVEIATYRKL
LEGEESRISLPIQNYSTMTFRETSPEHHHRVAESHSKKSVLIKTIETRDGEVVSESTQHQ
QDIM
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgagctcctaccgctcttctgctcagtcggcccagtctggctcctcctcctaccgccgc
acctttggcgcaggatacagccctgccatgtcccattccctctacagcagccggggctcg
ggcggggggctcggactcggacatggcggctccggccacatctcctcccgggtctacgaa
gtcaccaagacctctgcctctccctcttactccggctaccgcacctcgtctcactttggc
ggacctgtgatgtcatcgaccgcccacggttcgcggtcctacgcggggatgggggagacg
ctggacttcagcctggccgacgcactgaaccaggagttcctccacacgcgcaccaacgag
aaggtcgagctgcagcacctgaacgaccgcttcgccagctacatcgagaaagttcgcttc
ctggagcagcagaatgctacattggtggtggagattgagaggctgcgggggcgtgaaccc
acacgcatcgccgacctgtacgaagaggagatgagggacctgcgtcgccaggtggaggcc
ttgaccaatcagaggagccgcgtcgaggtggagagggacaacctgggcgaagacttggac
aaactcaaactcagactgcaggaagagatccttcagagagaggacgcagagaacaacctg
gctgctttcagagctgatgttgatgctgccactctggcccgtctagacttggagagacgc
atcgagacgctacaggaggagatcgccttcctcaagaagattcacgaggaggagatccgt
gagatgcagtcccagatgcaggagacccaggtgcagatccagatggacatgtccaagccg
gacctgacagctgccctcagggacatcagggctcagtacgagggcatcgccgccaagaac
atctcggaggccgaggagtggtacaagtctaaggtgacagacctgaaccaggcggtgaac
aagaacaatgaggctctgaaggaggccaagatggagaccatggagttcagacaccagctc
cagtcctacacctgtgagattgactcacttaaaggcaccaatgagtctctgatgaggcag
atgagagagatggaggagcgccacgggcgggaggccggcgggttccaggacaccatctcc
cgtctggaggctgaaatcgccaacatgaaggatgagatggccaggcacctgagagagtac
caggacctgctcaacgtcaagatggccctggacgtggagatagcaacctacaggaaactg
ctggagggagaggagagcaggatttccctgcccatacagaactattccaccatgactttc
cgtgaaacgagcccagagcatcatcaccgcgttgctgagtcacactcaaagaaaagtgtc
cttatcaagaccatcgagacccgtgacggagaggtggtctctgagtcaacacagcaccag
caggatatcatgtaa

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