Oncorhynchus mykiss (rainbow trout): 110527530
Help
Entry
110527530 CDS
T07259
Symbol
ahr1b
Name
(RefSeq) aryl hydrocarbon receptor isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110527530 (ahr1b)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110527530 (ahr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
HLH
bHLH_HIF1A
PAS_9
bHLH_NPAS4
PAS_4
Motif
Other DBs
NCBI-GeneID:
110527530
NCBI-ProteinID:
XP_021464546
Ensembl:
ENSOMYG00000042466
UniProt:
A0A8C7UIT1
LinkDB
All DBs
Position
7:complement(22832299..22908138)
Genome browser
AA seq
1025 aa
AA seq
DB search
MYAGRKRRKPVQRDIEVKDQKEKQTAPSEGAKSNPSKRHRDRLNSELDRLASLLPFPEEV
TSSLDKLSILRLSVSYLRTKNFFSVALKTQACKGLKANGGNHDSSETTGLVDGWMPEGEL
LLQALNGFVLVITADGVIFYSSHTIQDYLGFHQTDVMHQSVFDLIHTEDQQEFRRNLHWA
LNPPAVPQQVESPPDGKPVPSSSLVTYNPDQLPPENSSFLERNFVCRFRCLLDNSSGFLA
LTLQGRLKFLHGQNCRLDDGGNVPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFT
PMACDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMIKTGESGLTVFRLLTK
DNRWRWVQANARLVYKNGKPDYIIATQRPLVEEEGGEHLRKRSMHLPFTFATGEALLYQS
SYPIHGLTDSLQAKGKTKSKKGKLDKNPSKDNGGLDPSSLLGALMRQDESVYVCQPAVEP
KMSFHSSLFSEGGEGKGQSSGYYSCGPPGGGVGESWSSVPNGVTTISTGHNGEPPSCFDP
LLATLDSLSLEGDETCSNSELFSALENLGLNAEDLELLLLDERMIRVEMDPDYIPSLNDL
LTNNEILAYIHDSLENKTEEGQGGDSHVSIPPPSTTTHPPGPILNSALILNPHTQAAPTM
HISTFHPQATDPPAPQPMLPPHRLPKQPPIVQLSQQMQQHLNLVKPVLEKYPWPPTQTDV
PTPSQPDTLQHTNSLTLVHNGHWLPQQQHMLAGMNDHCQSLHPLVNSKTSQLGLHGAGQL
KQHQHQNNIHLQSQWQQHNQHLQVQLQSPCHFKQQKASSNSSATLNGVHPDPDWQSSSYD
DQLGLTANGANGACTVSYPNGHADTLTHTTEGEVSHTDYCMGDLTTVGMVMNGVTVGGIS
HYQGQGGVTANPSDHLVHHKQHSPQVPSTYFPQYSTTQNSLDYILGLSQPQHTMPTLDAY
GILNSPASQDATLCKMENGCILNDTNVAYTGSCLLPNVNSQTTSDSLQPDALHTLPDPQT
TGFYL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctggacggaaaagaagaaaaccggtgcaaagagacatcgaagtgaaagaccaa
aaagagaaacagacagctccatctgaaggggccaagtctaacccatcaaagcgccaccgg
gaccgtctgaactctgagttggaccgtctggccagtctactgcccttcccagaagaggtc
acttccagcttggataaactctctatcttacggctcagtgtgagctacctgaggaccaag
aacttcttctcagttgccctgaagacccaggcttgcaaggggttgaaggccaacggtggt
aaccatgacagcagcgagacaacgggattggtggacggctggatgcccgagggtgaactc
ctattgcaggcccttaatggtttcgtcctggtcatcactgcagacggggtcatattctac
tcctctcacaccattcaggattacctgggattccaccaaacggacgtgatgcaccagagt
gtgtttgatctgatccacactgaggaccagcaggagtttaggaggaacctccactgggct
ctcaaccccccggccgtgccccagcaggtggagtcacccccagatggaaaaccagtcccc
agctcgtccctggtgacctataaccccgatcagctgcctccagagaactcctccttcctg
gaaaggaacttcgtctgtcgcttccgctgtctcctcgacaactcttctggcttcctggcc
ctgaccctccaaggccgtctgaagttcctgcatggccagaactgccggctggatgacggc
ggcaacgtgcccccccaactggccctgtttgccatcgctacccccctccaacctccatcc
atcctggagatcaggaccaagaacatgatcttcaggaccaaacacaagctggacttcacc
cccatggcctgcgatgccaaggggaagatcgtgctgggctacaccgaggctgagctccgg
gttcgaggctctggataccagtttatccatgcagctgatatgctctactgtgctgagaac
cacgtccgcatgatcaagacaggggagagcgggctgacggtgttcagactgctcactaag
gataaccgctggaggtgggtccaagccaacgccagactggtctacaagaacggcaagcct
gactacatcatcgccacccagaggcccctggtggaggaggagggaggagagcacctgagg
aagcgttccatgcacctccccttcaccttcgccacgggcgaggcccttctctaccagagt
agctaccccatccacggcctcaccgactcactccaggctaaaggcaagaccaaatccaag
aagggcaagctggacaagaacccgtcgaaggataatggtggactggaccccagctccctg
ctcggggcgctgatgaggcaggatgagtccgtgtacgtgtgccaaccagccgtcgagccc
aagatgtccttccacagtagtctgtttagtgagggaggtgaggggaaagggcagagcagt
ggatactatagctgtggccctccgggtgggggtgtgggagagagctggagctctgtgccc
aacggggttaccaccatctccactggccacaacggagagcctccgtcctgcttcgacccg
ctgctcgccaccctggactcactgtctctggagggggacgagacatgctctaacagcgag
ctgttctctgctctggagaacctgggtctgaacgcagaggatctggagctactgctgctg
gatgagaggatgatcagagtggagatggatccggactacatcccctcgctcaacgacctg
ctcaccaacaacgagatcctcgcctacatccacgactcgctggagaacaagaccgaggag
ggccagggtggggacagtcacgtgtccataccaccaccttcaaccacaacccatccccct
ggccctatccttaattctgcccttatccttaaccctcatacccaagctgcccccactatg
catatctctaccttccacccccaagctactgaccctcctgcccctcaacccatgttaccc
cctcacagactaccaaaacagccacccatagtgcagctctcccagcagatgcagcagcac
ctcaacttagtaaaacccgttctggaaaaatacccctggcccccgacacaaacggacgtc
cccacgccaagccagccagacaccctgcagcacacaaactcactaaccttggtccataat
ggtcactggcttccccagcagcagcatatgcttgcggggatgaatgaccactgccaaagt
cttcaccccctggttaacagtaagacatcccagctggggcttcacggggccgggcagctc
aaacagcaccagcaccagaacaacatccatcttcagagccagtggcagcagcacaaccag
cacttacaggtccagcttcaatctccgtgtcatttcaaacagcagaaggctagtagcaac
agcagtgccactctcaacggggtgcaccctgatcccgattggcagagttccagctacgac
gaccagttgggactgaccgctaatggagctaatggagcctgcaccgtctcctaccccaac
gggcacgcggacaccctcacacacactacagaaggagaggtctctcacacggattactgt
atgggtgatttgactaccgtgggcatggtcatgaacggggttacggtagggggcataagt
cactaccagggacaaggaggggtgaccgctaacccctcagaccatctggtgcatcacaaa
caacattctccacaggtcccatccacctacttccctcagtactccaccacacagaactcc
ttagattacatcctggggctgtcacagcctcaacacaccatgcctactctggacgcctac
ggcattttgaatagccccgcttcccaggatgccactctctgtaagatggagaacggctgc
atcctcaacgacaccaacgtggcttacacagggagctgtctactgcccaatgtgaacagc
cagacaaccagcgacagtcttcagcccgacgccctacataccctgccagacccacagact
actggcttctacctctga
DBGET
integrated database retrieval system
