Oncorhynchus mykiss (rainbow trout): 110527657
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Entry
110527657 CDS
T07259
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110527657
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
General mRNP proteins
110527657
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
RRM_7
RBD_DEAH11
PRP38_assoc
RRM_10
CDC45
Motif
Other DBs
NCBI-GeneID:
110527657
NCBI-ProteinID:
XP_021464748
Ensembl:
ENSOMYG00000005663
LinkDB
All DBs
Position
7:32345648..32407998
Genome browser
AA seq
534 aa
AA seq
DB search
MADDFDIEAMLEAPYRKDEIKHSSPNGHKERSKKKKKSRSRSRDRKRSKSRDRKKSHDHK
RSRSHERKRSRSRERRRSRERSGRYRDHKTTFSGPKFNGGSRGKIGPPPVIKLSRRRSRS
RSPFKKEKSPVRQVFLGEMTQKTSIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFF
SAVGKVRDVRMISDRNSRRSKGIAYIEFVEANSVPLAIGLSGQRLLGVPIIVQASQVMAE
KNRAAAMANNLQKGNAGPMRLYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSK
GYGFITFSDTECAKKALDQLNGFELAGRPMKVGHVTERTDASNASSFLDNDELERTGIDL
GTTGRLQLMARLAEGTGLQIPPAAQQALQMGGAIAIGAMAAVSAAMNPAMNMNMNTAMNL
PSQPLATHCFQLSNMFNPRSEDNPGWDVDIQHDVIEECNKHGGVVHIYVDKNSTEGNVYV
KCPSVPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLFPDSVKTTQLLIPLAH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgactttgacatagaagcaatgcttgaggctccatatcgaaaggatgagatc
aagcacagtagtccaaatgggcacaaggaacgcagcaagaagaaaaaaaagagcaggagt
cgaagcagagacaggaagagaagcaaaagccgggatcgcaagaagagccatgaccacaag
cggagccgcagccacgagcgaaagcggagccgcagcagggagaggcgccggagcagagag
cgcagcggccgctatagggaccacaagaccaccttctctgggccgaaatttaatggtggt
tccagagggaagattggccccccacctgtcatcaagctaagccgaagacgttccagaagc
cgaagccctttcaagaaagagaagagtcctgtgaggcaagtgttccttggggagatgacg
caaaagacctcaatcaggcagccaatagacaacctgactccagaggaaagggacgctcgc
acagtgttctgcatgcagctggcagccagaatccgaccacgtgacctggaggagttcttc
tctgcagtaggaaaggtgagagatgtgcgcatgatctctgacagaaattcgaggaggtcg
aaggggattgcttacatcgagtttgtggaggccaactcggtgccactggctataggattg
tctggccagcgacttctgggggtgccaataattgttcaggcctcacaggtaatggctgag
aaaaacagggctgctgccatggccaacaacctgcagaagggcaacgctggcccgatgaga
ctctacgtcggatccttacactttaacatcacagaggagatgctacgaggaatatttgag
ccttttggaaagattgagagtattcagctcatgatggatagtgagacggggagatccaaa
ggatatggcttcatcactttctcagacacagagtgtgccaagaaggctttggatcagttg
aacggctttgagctggctggccggccgatgaaggtgggccatgtgactgagcgcacagat
gcctccaacgccagctccttcctggacaacgacgagctggagaggacaggcatcgacctg
ggcaccactgggcgcctgcagctcatggccagactggctgaaggcacgggactgcagatt
cccccagcagcacagcaagccctgcagatgggtggggccattgctattggtgccatggcc
gctgtatcagctgccatgaatcctgccatgaatatgaacatgaatacagctatgaacttg
ccctcacagccacttgctacacactgtttccagctgtctaacatgttcaaccctcggtct
gaagataacccaggctgggatgttgacattcagcatgatgtcattgaggaatgcaacaaa
catggaggagttgtgcacatatacgttgacaagaattccactgaaggcaacgtgtatgtg
aaatgtccatccgttcctgctgccatggctgcagtaaacgcattacatggtcgatatttt
gcaggtaaaatgatcacagcggcatatgtccctctcccaacatatcacaaccttttccct
gactctgtgaagactacccagctcctgatccctcttgctcactga
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