Oncorhynchus mykiss (rainbow trout): 110527665
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Entry
110527665 CDS
T07259
Symbol
map1lc3a
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3A
KO
K10435
microtubule-associated protein 1 light chain
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137
Mitophagy - animal
omy04140
Autophagy - animal
omy04216
Ferroptosis
omy04371
Apelin signaling pathway
omy04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
110527665 (map1lc3a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110527665 (map1lc3a)
04137 Mitophagy - animal
110527665 (map1lc3a)
09143 Cell growth and death
04216 Ferroptosis
110527665 (map1lc3a)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110527665 (map1lc3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110527665 (map1lc3a)
03029 Mitochondrial biogenesis [BR:
omy03029
]
110527665 (map1lc3a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110527665 (map1lc3a)
Membrane trafficking [BR:
omy04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
110527665 (map1lc3a)
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
110527665 (map1lc3a)
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
110527665 (map1lc3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
YneP
Motif
Other DBs
NCBI-GeneID:
110527665
NCBI-ProteinID:
XP_021464769
Ensembl:
ENSOMYG00000006838
LinkDB
All DBs
Position
7:32848895..32879742
Genome browser
AA seq
121 aa
AA seq
DB search
MPSDRPFKQRRSFADRCKEVHQIRDQHPNKIPVIIERYKGEKQLPVLDKTKFLVPDHVNM
SELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPISEIYEQEHDEDGFLYMVYASQETFG
Y
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgatagaccattcaaacaaagaaggtcattcgctgatcgttgcaaagaagtg
catcaaatccgtgaccagcaccccaacaaaatcccagtaatcattgagcgttataaggga
gagaagcagctgcctgtgttggacaagacaaagtttcttgtccctgaccatgtcaacatg
agcgagttagtgaagataatcaggcgccggctgcagctcaaccccacgcaggccttcttc
ctcctggtcaaccagcacagcatggtgagcgtctccacgcccatctccgagatctacgag
caggagcacgacgaggacgggtttctctacatggtttacgcctctcaggagacttttgga
tactag
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