Oncorhynchus mykiss (rainbow trout): 110527695
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Entry
110527695 CDS
T07259
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1 isoform X1
KO
K16797
zinc finger protein GLI1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110527695 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110527695 (gli1)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
110527695 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
110527695
NCBI-ProteinID:
XP_021464810
Ensembl:
ENSOMYG00000021075
UniProt:
A0A8C7VTL0
LinkDB
All DBs
Position
7:complement(37087748..37208952)
Genome browser
AA seq
1528 aa
AA seq
DB search
MPVDMQPHQGLYHYESTPNQPARGLASSGRSPYSEVSSLHAPLHNGHPQDCRNMYNPMTP
NPRINPNSGVNPMDQYMRPPLAPPLHSMMGHRSMNQSSDGGNSTPYCHNNLMSSHHGFPH
GQGLDHVGDGSRFSTPRSMLKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAFVNSRCG
PNGASSYGHLSVGAMSPSMGYSNSMNYQSRQQSSMYGGHTPGPCHAPPPRLPPHNPRLHA
PKHGHLKTEPVLGSLMDGINIKSLEERSEGDVASPSSTGTQDPLMGLLEGREDLDKEDKP
EPEAIYETNCHWESCSKEFDTQEQLVHHINNEHIHGEKKEFVCHWQECSREQRPFKAQYM
LVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASD
RAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDTGPRPPG
SSLTPGGQSGELLLEKEETRHREDCKLLAPESALKSQPSPGGQSSCSSERSPLGSANNND
SGVEMNLNAAGSLEDLTALEDGGAGGGEAGGRGQGMAGMGGTSSQALKRLENLKIDKLKQ
IRRPTPPGRCGRSSKLPALTGCPGEMMGGMCTPSPLLSNRRVMELSNHEQGGGPSGMPPP
LSDRRGSGTSSLSSAYTVSRRSSMVSPYLSSRRSSEVSQLGGGGGGFLGPDQGGGDPLSP
ETSRRRGLCHGVGGGGGLPGLPCLTPAQQYSLKAKYAAATGGPPPTPLSSMEQGAGTPGR
RGVLLSEYQGQPLPAFLQQGGQRKHSANTGEYGTGVIYPHQAPGNATRRASDPVRSTGDP
QALPKVQRFNSLNNVAMMGRRNALQHCGSDANIARHMYSPRPPSITENVMMEAMATDYHG
GTMDSRNHCMMLSPGERGFLGYQSHHMGGPTSLLSPSHDSLGCAEQGYQTQGQMFMQGGH
FQGTSRGPGQGQVGQGGPIHPEGMSNILLQQAEYSMSTCQLSPSGPHYPSLDQGGPDGGT
GAWVESNQVQTTHGVLQTEMQYQDQGSMQGQTQGLYTQEPDGGHKLIIKPEQQQYHPALA
NPDACQKQLHQHQQQRPHPGQTPMPMRPMSSQSSYPQQGQPGQGMMRTTNPSCDFHGGGM
ENQNQASMQQGKQQGSFPQSGGINLGSAALGAGGRSQTPMMQVKEMMVRNYVQSQQALMW
GQEQDQRGIGVDGKPLPLSDSMDMTGQQVAMMQQQHSPQHQHNLYPNPGSSYPGYPTNQN
LMSPPAHNRVPSSSSSIPQTEVSMTGLPGGPGSCYGQDMGAPVVPRPPQCRKPVSRQNSL
QSQGGGAYLGSPPHLSPVHSTSSPRRVVRLPPVQGHMTPHQTHQEIFPPLNNINNNMYYS
GQIHMEHSDMDKQQIQQISHPHQDPTQTGPCLNQHQQHMVTHMDHQGNKSASLAYLHEST
PISNALENLDLDNAQIDFTSIIDDPDPSSFSPINPPLHGGSSQTSSRLTTPQTSITMPPS
GLPNMAVGDMTSMLTSLAGENKYLNTLS
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagccacatcaggggctgtatcattatgagtctacacccaaccag
ccggccagaggccttgcttcttcaggaaggtctccctacagtgaagtgtcatccctgcat
gctccgctccacaatggccatcctcaggactgcaggaacatgtataacccaatgacccct
aaccccagaatcaatcctaactccggtgtcaacccaatggaccagtacatgagaccccct
ctggctcccccactgcacagcatgatgggacaccgcagcatgaatcagtcctccgacggt
ggtaatagcaccccctactgtcacaacaacctcatgtcatcccaccacggcttcccccat
ggacagggattagaccatgtgggagacggctcgcggttctcaacgcctcgctccatgctg
aagctgagtaagaagcgtgccttgtccatctcgccgctgtctgacgccagcgtggaccta
cagacggtcatcagaacctctcctaactccctggtggccttcgtcaactcacgttgtgga
cccaacggagccagctcctacggacatctgtctgtgggcgccatgagtccatcaatgggt
tactccaactcaatgaactaccagtccagacaacagagctctatgtatggtggacacacc
cctggaccctgccacgctcctcccccccgactacccccccacaacccccgcctccacgca
ccaaaacatggacacctaaagacagagccagtgctgggtagtctgatggatgggatcaac
attaagagtctggaggaaaggtctgagggtgacgtggccagcccatcctctactggcaca
caggatcctctgatgggtctgctggaggggcgggaggatctggataaggaggataaaccg
gaaccagaggccatctatgagaccaactgccactgggagagctgcagcaaggagtttgac
acgcaggagcagctagtccaccacataaacaacgagcacattcatggagagaagaaggag
tttgtgtgccactggcaggagtgttccagggagcagagacctttcaaggcccagtacatg
ctggtggttcacatgcgcaggcacacaggagagaaacctcataagtgtacttttgagggc
tgtaataaggcctactctcgcctggagaacctgaagacccacctgcggtctcatacaggg
gagaagccgtatgtctgtgaacacgagggatgcaacaaagccttctccaacgcctcagac
agagccaagcaccagaaccgcacacactccaacgagaagccgtatgtgtgtaagatcccc
gggtgtacgaaacgctacacagaccccagctctctgcggaagcacgtgaagacagtccac
ggccctgaggctcacatcactaagaagcaccgaggggacactgggccccggccgcctggc
tcatcactgacccctggtggacagtctggtgaactgctgctggagaaagaggagactaga
cacagggaggactgcaaactgctggcgcctgaatctgctctgaagtctcagcccagtccg
ggtggccagtcgtcctgcagtagcgagcgttctccactggggagcgcgaacaacaacgac
agtggtgtggagatgaacctgaacgcagcagggagtctggaggacctgaccgctctggag
gacggaggggcgggaggaggggaagctgggggaagagggcagggtatggcagggatgggg
ggcacgtcgtctcaggccctaaagagactagagaacctgaagatagacaagctgaaacag
atcaggaggcccactccacccggacgctgtggtaggagtagcaagctaccagcactcaca
ggttgtccaggagagatgatgggagggatgtgtactccctcgcccctcctctccaaccgg
cgcgtcatggaactgtccaatcacgagcagggcggcggaccctctggcatgcccccccct
ctcagtgaccggaggggaagtggcaccagcagcctgagctctgcctacacagtgagccgt
cgttcttccatggtgtccccctacctctccagccggcgctcgagcgaggtctcccagtta
ggaggaggtggaggagggttcctgggtcctgaccagggaggaggtgaccccctctcccct
gagaccagccgccgaagagggctctgccatggtgttggagggggaggagggttgccaggt
ctgccatgtctaacacccgctcagcaatacagcctgaaggctaagtatgcagcagcaact
ggcggcccaccccctaccccgctgtccagtatggaacagggagcagggacacccgggaga
cgaggagtgctcctcagcgagtaccagggtcagccgctacctgcgttcctgcagcagggg
ggtcagagaaaacacagtgccaacacgggggagtatggcactggggtcatctacccgcac
caagccccagggaatgccacccggcgcgccagcgaccctgtccgctccaccggcgaccca
caggcccttcccaaggtgcaacgcttcaacagcctgaataatgtggccatgatgggcagg
aggaacgccctgcagcattgtgggtcagacgccaacatcgcacgccacatgtattcgccg
cggccacccagcattacagagaatgtcatgatggaggccatggctacagactaccatgga
gggaccatggattccaggaaccactgcatgatgctttccccaggagagagaggcttcctg
ggctaccagtcccaccacatggggggtcccaccagcctgttatcacccagccacgacagc
ctgggatgcgcagagcagggctaccagacacagggacagatgttcatgcagggtgggcac
ttccagggcacctccagaggaccaggtcagggccaggtggggcaggggggacccattcac
ccagaggggatgtccaacatcttgctgcagcaggctgagtacagtatgagtacctgccag
cttagtccctctggaccacactaccccagcctggaccaaggtggccccgatggaggtaca
ggggcctgggtagagagcaaccaggtccagaccactcatggagttcttcagacggagatg
cagtatcaggaccagggctctatgcagggccagacacagggtctgtacacccaagagcct
gatggcggacacaaactgatcatcaaaccagaacagcagcagtaccacccagccctagcc
aacccagatgcctgccagaagcaactccatcaacaccagcagcagaggccccatccaggg
cagacacccatgcccatgcgacccatgtcctcccagagcagttacccccaacaagggcag
cctggccagggcatgatgaggaccaccaaccccagctgtgacttccatggaggaggcatg
gagaaccagaaccaggcctccatgcagcaagggaagcagcagggttccttcccccaaagc
ggcggcatcaacctggggtcggctgcgctgggtgctgggggtcgctcccagacacccatg
atgcaggtgaaggagatgatggtgaggaactatgtgcagtcgcagcaggctctgatgtgg
ggtcaggagcaggaccagagggggataggagtggacgggaaacctcttcctctgtcagac
agcatggacatgacaggacagcaggtggccatgatgcagcaacagcatagtcctcaacac
caacataatctctaccccaacccaggctccagctacccaggctaccctaccaaccagaac
ctgatgagccccccagcacacaaccgagtccccagctctagctcctccatcccccagacg
gaggtatccatgacgggtctgcctggaggcccagggtcctgctacggccaggatatgggg
gctcctgtagtcccaagacccccccagtgccggaagcccgtcagcaggcagaatagtctc
cagtcccagggaggtggagcgtacctgggcagtcctccccacctcagcccagtccactct
acctccagccccagacgtgtggtccgtctgccccctgtccagggccacatgaccccccat
cagacccaccaggagatcttcccccccttaaacaacattaacaataacatgtactactct
ggccagatccacatggagcactctgacatggacaagcagcagatccaacaaatcagccac
cctcaccaggacccaactcagaccgggccctgcctcaaccagcaccaacagcacatggta
acccacatggatcaccagggcaataagtctgcgtccctagcctaccttcatgagtcgacc
cccatctccaatgctctggagaacctagatctggacaacgcccagatagactttacctcc
atcatcgatgacccagacccctcgtcattcagccccatcaaccctcctctccacgggggt
tcgtcccagacctcgtcccgcctcaccacccctcagacatccatcaccatgcccccctct
gggctcccaaacatggctgtaggagacatgacctccatgttgacatctctggccggagag
aacaagtaccttaatacactgtcttag
DBGET
integrated database retrieval system
