Oncorhynchus mykiss (rainbow trout): 110527849
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Entry
110527849 CDS
T07259
Symbol
ift52
Name
(RefSeq) intraflagellar transport protein 52 homolog
KO
K19681
intraflagellar transport protein 52
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110527849 (ift52)
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
110527849 (ift52)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
OST48_N
DUF4350
DUF2194
Motif
Other DBs
NCBI-GeneID:
110527849
NCBI-ProteinID:
XP_021465084
Ensembl:
ENSOMYG00000018950
LinkDB
All DBs
Position
7:44546254..44551269
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AA seq
434 aa
AA seq
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MEKEQRSSVVFNASKRELFTANNGYKSLQKRLRAQWKIQSMKEELSLEKLNGVKLWITAG
PREKFTAAELEVLKQYLDGGGDVLVMLGEGGEMKYDTNINFLLEEFGIMVNNDAVVRNVY
YKYFHPKEALVSNGVLNREISRAAGKVVTGIIEDESVGNNAQALTFVYPYGATLSVMKPA
VAVLSTGSVCFPLNRPVLAFYQVKEAGKLAVMGSCHMFSDQYLDKEENSKIMDVVFQWLM
GDNIILNQIDAEDPEITDYTMLPDTGCLSERLRVCLQEGEENPRDFTSLFDMSLLKLSTN
TLPQVISSYKQMNVKHEPLQLITPQFETPLPQLEPAVFPPAFRDLPPPMLDLFDLDETFS
SEKVRLAQLSNKCTDDDLEFYVRKCGDILGVTGKLDKDQRDAKHILEHIFFQVVEFKKLN
QEHDLDTETRFSPF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagcagcgcagcagtgttgtttttaacgcatccaagagagaactgttcact
gccaacaatggttacaagtccctgcagaagagactcagggcacaatggaagattcagagc
atgaaagaggagctctccttggagaagttgaatggtgtgaagttgtggattactgctggc
cccagggaaaagttcactgcagctgagttggaggtcctgaagcagtacctggatggggga
ggagatgtccttgtgatgctgggtgaaggaggggagatgaagtatgacaccaatatcaac
ttccttcttgaggagtttgggataatggtcaacaatgatgctgtcgtgaggaatgtatac
tacaagtatttccatccaaaagaagcacttgtgtccaatggtgttctgaacagagagatc
agtcgggctgcaggcaaagtggtgacagggatcatcgaagatgaaagtgtcggcaacaat
gcacaggccctcacatttgtgtacccgtatggagcgacactgagcgtgatgaagcctgct
gtggctgttctctccactgggtccgtctgcttccccctcaacaggcctgtcctcgccttc
tatcaggtcaaggaggcaggcaaactggcagtgatggggtcctgtcacatgttcagtgac
cagtacctggacaaagaggagaacagtaaaataatggatgtcgttttccagtggctcatg
ggtgataacattattctgaaccagatagatgcagaggaccccgagatcacagattacacc
atgctgccagacacaggctgcctgtctgagcgactgcgagtatgcttgcaagagggagag
gaaaatccaagagactttacctccctgtttgacatgtctctacttaaactatcaacaaac
acgttgccccaagtcatcagttcctacaagcagatgaatgtcaaacacgagcctctccag
ctgatcacacctcagtttgagactccccttccacagctggagcctgctgtcttcccgcct
gccttcagggatctgcctccccccatgcttgacctctttgacctggatgaaaccttttct
tctgagaaggtgcgtttggcacagctctccaacaaatgcacagacgatgatctagagttc
tacgtgaggaagtgtggggacatcttgggggtgacggggaagttggataaagatcagaga
gatgccaaacacatcctggagcacatcttcttccaggtcgtggagttcaagaagctcaat
caggaacatgatcttgacacagagaccaggttttccccgttctga
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