Oncorhynchus mykiss (rainbow trout): 110527867
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Entry
110527867 CDS
T07259
Symbol
chl1b
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110527867 (chl1b)
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
L1 family
110527867 (chl1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_5
C2-set_2
FN3_DSCAM-DSCAML_C
Ig_4
Pur_ac_phosph_N
Ig_PDGFR_d4
Ig_6
HMUDK_HMUD1
Motif
Other DBs
NCBI-GeneID:
110527867
NCBI-ProteinID:
XP_036839230
Ensembl:
ENSOMYG00000011770
LinkDB
All DBs
Position
7:complement(45236873..45312977)
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AA seq
1308 aa
AA seq
DB search
MVVCCVAMRMRSSMWSPGLALLTGVVVSVCAFHLTTAIDIPMEVLGHVNIEQLPTITESS
PSSLIAFPFDESFPMTCEAKGNPKPEYRWTKNGEEFDPYQDPKLIKEDNSGTFVIPNTGN
LTEYQGTYRCYAENELGTAITEEIEFVVPHVPKFPKEKIDPIKVEEGQPVILECNPPKGI
PPLQIYWMTIDLQHIEQDERVSMGLNGDLFFSNALEKDSRRDYCCFAAFPRIRTIVQKNA
MSVIVKSKNSNSDSSSSPGRANSILERKPSLLMPSGVKSETQLVKGDELLLECIAEGFPT
PKIEWVRMGHRLPDRATIENHGKLLSIDRVNEDDSGKYRCKAKNIHGEANHSFDVSVEEP
PKWVSEPESQLSTIGSDVQIKCSATGTPQPTIQWRVNGKPLKEVPASNRKVLDDTIVLHN
AKSIDSAVYQCEASNRHGTLLANANIMIMNLPPMVLTEEGLEYSAVEGKSVVMHCKVFSS
PPSIVTWNKDDSTGSVEGPRFTVHQNGSLEIHNVEKEDMGQYTCYTKNTEGKSAITALLD
VKDPTKIFQAPEDLQVLIGTTAQLSCLAVYDNSFSGDFEIVWEKDDMEIALNHTENSGYF
LEDGILQIVNVSHRDHGMYKCVARTPVDQDTASALLIVLDVPDAPENLVLSEHKGRSVKL
KWIPGDDHNSSTTDFIIEYEESQWEPGNWNELQRVPGNHGSAVLKLYGHVDYRFRVSGVN
AVGRGRPSEPTERYKTPPAAPDKNPENIKIEGHLAHEMDINWEPLSPIEHNGPGLEYKVS
YKRQDVEEDWHEHVVKRHSFVVKGTPTFVPYEVRIQARNYQGWGPEPKVMTGYSGEDFPS
AAPDDVAVEVMNNSLVKVSWTRVHKEKLHGHLGGYRINWWRLRSLLDSKKTQGNKHTLTF
PGDRNHAMVPALAPFSEYSLIVMTFNGRGNGPGSHAVNFKTPEGVPEENPVFRVTDVQKH
TVALTWAPPLVANGVVTGYRLEYQLINDTEEVGVLQSMDISSPDTTSCVLRNLEAVSRYK
FYLRSCTRVGCGPQVSEESTTTPVAPSTAVSTVNFSQSASPSPPSTAVSHVSNATHSNIV
PALLNISSSVSDNFANISWIPGSEQTDSEFYVAYVNNRKGNWKISEAVNTSKTFHIIEGL
EPGTAYTVRLMTNNWVDNSSIFEDVIRTRDKGLASIHGGISTQGWFIGLMCAVAVLTLIV
LIACFVNRNKGGKYAVKEKEDLHPDLESQGMHDDTFCEYSDNDEKPLKGSQHSLSGQIKA
EDSGDSLVDYGDEDAQFNEDGSFIGEYAGRKEKRVSMEVKGTTNQSKA
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggttgtctgctgtgtcgcgatgaggatgaggtcatcgatgtggagcccaggattggct
ctcctgacgggcgtggtcgtcagtgtctgtgcctttcacctcaccactgccattgacatc
ccaatggaggttttaggtcatgtaaacattgagcagctgcccaccatcacagagtcctcc
cccagctctctgatcgccttccccttcgatgagagcttccccatgacgtgtgaagccaaa
gggaaccccaagccagaataccggtggacaaaaaatggggaagagtttgacccctaccag
gacccgaagctgatcaaggaggacaactctgggacatttgtgatccccaacactgggaat
ctcacagagtaccagggaacgtaccgctgttacgccgagaacgaattagggacggccata
acggaggagattgagtttgttgtgccccacgttcctaagtttcccaaggagaagattgat
cccatcaaggtggaggagggtcagcctgtcattttggagtgtaaccctcctaaaggaatc
cctcctttacagatctactggatgaccatcgaccttcagcacatagagcaggacgagagg
gtgtccatgggtctgaacggtgacctgttcttctctaatgctctggagaaggacagccgc
agagactactgttgcttcgctgccttccccaggattcgcaccatcgtccagaagaatgcc
atgtctgtcatagtcaagagcaaaaattcaaacagtgactcaagtagcagtcctggtcgt
gccaattcaatcctggagagaaaaccaagtcttctgatgccctctggtgtcaagtcggag
acacagctggtgaaaggtgacgagctactactggagtgcattgccgagggctttccaaca
cccaagattgaatgggtaaggatgggccacaggctgcccgacagagcgacgatagagaac
catgggaaactcctgagcattgaccgggtcaatgaggacgacagtgggaaatacaggtgt
aaggctaagaacatccacggagaggccaaccactcctttgatgtatcagtggaagagcct
cctaagtgggtatctgagcctgagagccagcttagtacgattggctcagacgtgcaaatc
aagtgctctgccactggtactcctcagcccaccatccaatggagggtgaatggaaaacct
cttaaggaggtcccagcatctaacagaaaggtgttggatgacaccattgtcttgcacaac
gccaaatcgattgacagtgccgtctatcaatgtgaggcttccaacagacatggaacccta
ctggccaatgccaatatcatgatcatgaatctgcctcctatggtcctgacagaggaaggt
ctggagtattcagctgtggagggaaagagtgtagtcatgcactgcaaggtgttcagctct
ccgccctctattgtaacctggaacaaggatgactcaacagggtctgtggagggaccaagg
tttacagttcaccagaatggatctttggagatccataatgtggagaaagaggacatgggc
caatacacatgttacaccaagaatactgaagggaagtctgctataactgccttactggat
gttaaagatcccacaaagatattccaggccccagaggacttgcaggtcctaataggaacc
acagcccagctctcctgcctggcggtgtacgacaactccttcagtggcgactttgagatc
gtgtgggagaaagacgatatggagatagcactaaaccacactgagaattctggatatttc
ttagaggatggcatactgcagatcgtcaacgtcagccacagagaccatggcatgtacaag
tgtgtggccagaactccagtggaccaggacactgcctctgcactactcatagtgctggat
gtccccgatgcacctgagaatttggtgctgtctgaacacaagggcagaagtgtgaagctc
aaatggatccctggggatgaccacaacagctcaaccactgacttcattattgagtatgag
gagagccagtgggagccagggaactggaacgagcttcagagagttccaggaaatcacggt
tcggcagtcctcaaactttatggacatgttgactatcgctttcgagtgtctggagtcaac
gcggtgggtagggggcgtcccagtgagcccacagaaagatacaagacccctcctgcagcc
cctgacaagaaccctgaaaatattaaaatcgaaggtcatttggcacatgaaatggatatc
aactgggagccattgtcccccattgaacacaatgggccaggccttgaatataaggtgagc
tataaacggcaggatgtggaggaggactggcacgagcatgtggtgaaaagacactcgttt
gtggtgaagggcactcccacgtttgtgccatatgaggtcaggatccaggcgaggaactac
cagggatggggacctgaacccaaagtgatgactggctactctggagaggacttcccctcc
gcggcccctgatgatgtggcggtggaggtgatgaacaactcgctggtcaaggtcagctgg
acgcgcgttcacaaggaaaagctgcatggacatctgggaggctacaggataaactggtgg
cggctgcgtagtctgctggactcaaagaagactcaagggaacaaacacacgctgacattc
ccgggggacaggaaccatgccatggtaccagcgctcgcgcccttctctgagtacagcctc
atcgtcatgaccttcaacgggcgaggcaacgggccaggcagccacgccgtcaacttcaaa
actcccgagggagttccagaggaaaaccctgttttcagggtcacagatgttcagaagcac
accgtcgccctcacctgggcacctcctctggttgccaatggagtcgtcacaggataccgg
ctagagtatcagctaatcaacgacacagaggaggtgggtgtcctgcagtcgatggacatc
agcagcccggacaccacctcgtgtgtcctgcggaacctcgaggccgtcagcaggtacaag
ttctacctgcgctcctgcaccagggtgggctgtgggccccaggtcagcgaggagagcacc
accacacctgtagcgccttcaacagcggtatccactgtcaacttcagccagtctgcctcc
ccctcacctccaagcactgcagtctcccacgtgtccaatgccacccattccaacatagtc
ccagccctgttgaatattagttcctcagttagtgacaactttgcaaatatcagctggatt
ccaggaagcgaacaaaccgattcagagttttatgttgcatatgtgaacaaccgtaaaggt
aactggaagatctctgaggcagtaaacacctctaagactttccacatcattgaggggctg
gagcctgggactgcgtacactgtgcgccttatgactaacaactgggttgataattctagt
atttttgaagatgtaatcaggaccagggataaaggtctggcaagcatccatggaggaatc
tccacccagggctggttcatcgggctgatgtgtgccgtggctgtcctcacactcattgtg
ttaatcgcctgctttgtcaacagaaataaaggagggaaatatgctgtaaaggagaaagag
gacctccacccagaccttgaatcccagggtatgcatgatgacaccttctgtgaatacagt
gacaacgatgagaagccactgaagggcagccagcactctctgagcggacagatcaaagca
gaggacagtggggacagcctggtggactatggggatgaggacgcccagttcaacgaggat
ggctcctttatcggcgagtacgctggacgcaaggaaaaaagggtgtccatggaagtcaaa
ggaaccaccaatcagagcaaagcgtaa
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