Oncorhynchus mykiss (rainbow trout): 110527906
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Entry
110527906 CDS
T07259
Symbol
si:dkeyp-97e7.9
Name
(RefSeq) DEP domain-containing mTOR-interacting protein isoform X1
KO
K20402
DEP domain-containing mTOR-interacting protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04140
Autophagy - animal
omy04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
110527906 (si:dkeyp-97e7.9)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110527906 (si:dkeyp-97e7.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110527906 (si:dkeyp-97e7.9)
Membrane trafficking [BR:
omy04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
110527906 (si:dkeyp-97e7.9)
mTORC2 complex
110527906 (si:dkeyp-97e7.9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEP
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
110527906
NCBI-ProteinID:
XP_021465182
Ensembl:
ENSOMYG00000022642
LinkDB
All DBs
Position
7:complement(47559568..47563955)
Genome browser
AA seq
407 aa
AA seq
DB search
MEKMGSSINRKSMARLHKAKVMIAGEQLRLRLHDGKLIKDRRYHLRTYPNCFVAKELTDW
LISNKEAPDQATAVCLMQHLMDHDIVHHVCDKHPIFKDAKLLYRFRKDDGTFPFNTEVKI
FIRGQRLYEHLITGRDSILQLREEQGIAYQRSIPGCQLMDWLLQNGETESRRQGLEFCRA
LLEHGIIQHVSKKYDFFDSRLLYQFCINFRRRRHLSELLNETDRDKKEGASVHALEDNHA
DSPFVLPKIPPQEESSGFQSAVQPNKPLKMIPNVHQANLNSLQLHASGYLPPATLSSAPV
VRCNPKSVLKRNVTCEELLSPGAPFIKRVLTVMGDAVGWGFVIRGVAPVYVQAVDPGSPA
AAAGVKVRQFVCQVNGRSVLHLDYRQVTRLVMTGPHTVVLEVMEPLG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatgggaagcagcataaacagaaaatcaatggccagactgcacaaggctaaa
gttatgattgctggagaacaactgaggttgaggctgcatgatggcaaactgatcaaggat
cgacggtaccatctgcgcacttaccccaactgctttgtagccaaagagcttacagactgg
ttgatcagcaacaaggaagctcccgatcaggccacagcggtctgcctcatgcaacacctg
atggaccatgacattgtgcaccatgtttgtgacaagcaccctatattcaaggatgcaaaa
ttgctgtaccgtttccgtaaggatgatggcacatttccatttaacaccgaggtgaagatc
ttcatccgaggacaacgattgtatgagcatctaataacaggcagagactccattctgcaa
ctaagggaggagcagggtattgcataccagcgctccatccctggctgccagttgatggac
tggttgttacagaatggagagacggagagtaggcgccagggtttggagttctgccgtgct
ttgctagagcatggcatcattcagcatgtgtcaaagaagtatgacttctttgacagtaga
ttactgtatcagttctgcatcaattttcgccgccggcgccacctgtctgagctcttgaat
gaaactgatcgagacaaaaaggaaggtgcatcagtgcatgcactggaggacaaccatgcc
gacagcccctttgtcctgcccaagatccccccacaagaggaaagcagtggttttcaatct
gcagtgcagcccaataaaccattgaagatgatacccaatgtgcatcaggccaatttgaac
tctctgcagctacatgctagtggatatttaccccctgccacactctcctctgccccagtg
gtgagatgcaatccaaaatcagtgcttaagaggaatgtaacatgtgaggagctactgtcc
cctggtgcacccttcatcaagagagtgttgacggtgatgggagatgcagtgggctggggc
tttgtgatcagaggtgtggctccagtttacgtccaggcagtcgatcctggaagccctgct
gctgctgcaggggttaaggtgcgtcagtttgtgtgccaggtgaatgggcggagcgttctt
cacctggattaccgccaggtcaccaggttggtgatgaccggacctcacactgttgtgttg
gaggtcatggaaccactggggtga
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