KEGG   Oncorhynchus mykiss (rainbow trout): 110527925
Entry
110527925         CDS       T07259                                 
Name
(RefSeq) cadherin-4 isoform X3
  KO
K06797  cadherin 4, type 1, R-cadherin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514  Cell adhesion molecule (CAM) interaction
omy04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    110527925
   04519 Cadherin signaling
    110527925
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:omy04515]
    110527925
Cell adhesion molecules [BR:omy04515]
 Cadherins
  Major cadherins
   110527925
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro Cadherin_FAT4_N Ig_CLSTN Fibulin_C F59B103_C NCMAP Stevor DUF5527
Other DBs
NCBI-GeneID: 110527925
NCBI-ProteinID: XP_021465228
Ensembl: ENSOMYG00000033922
UniProt: A0A8C7T2K0
LinkDB
Position
7:48470687..48714043
AA seq 921 aa
MNLGSVLILTCTLVVDTSWATKADQPPKPPCRPGFSESFYTVFVSRDLLQGQNILKVKFD
DCQHSKAVDFESSDPNFSVRPDGSVYAEQEVANLSDPVQFMVTARGGHDPHIWETTVKLA
LAGHPPSVPVSQIGVEDMIARAWDSNPRVIKFPRKHQRSSSANGLRRQKRDWVIPPINVP
ENSRGPFPQMLVRIRSDQDLEKGIRYSITGAGADQPPIDVYNIDPVHGKMFVTRPLDREE
RASYHLRAHAVDMNGNKVESPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSKPGTLVMQV
TANDSDDDTTANGMVRYRILSQTPHMPIPNMFTINSETGDIFTVAAGLDREKVSQYTIIV
QATDMEGNLNFGLSNTATALISVTDINDNPPELTARTFSGEVPENRVNVVVANLTVIDRD
QPHSPNWAAQYRIASGDPQGHFLIRTNPVNNDGMVTVVKPVDYEQNRAFMLTVIVSNKAP
LASGIQSSLQSSAGVTISVQDVNEPPVFPSNPKSIRFEEGVPAGTTLTVFAAQDPDLFIH
QTVRYSKLSDPANWLRINRTNGQITTMAVLDRESMYVRNNIYEATFLAADNGKSGSPPAS
GTGTLQIHLIDVNDNAPVLLPKEAQVCERASPRSRVNITASDADADPHVGPFVFELPSYP
PSVRRNWTASRISGDYAQLRLRIPYLDAGVYDVPIIVSDSGNPPLSNRSMIKVKVCPCDD
NGDCTTTGAVAAAGLGTGAIIAILICIIILLTMVLVFVMWMKRREKERQAKPLLIDPEDD
VRDNILKYDEEGGGEEDQDYDLSQLQQPEALDHIICKPTGVRRVDERPVIAESQYPIRPS
LPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDY
LNDWGPRFKKLADLYGGGDDD
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgaatttaggctccgttcttatactgacgtgcaccttagttgtggacacatcttgggcg
accaaggcagaccaaccacctaaacccccatgcagaccaggcttttccgagagcttctac
acagtctttgtctctagggatctactgcaaggccagaacattctcaaagtgaagtttgac
gactgtcagcacagcaaggctgtggacttcgagagcagcgaccctaacttcagtgtgcgt
cctgacggctcggtgtacgcggagcaggaggtggccaacctgtctgatccagtccagttc
atggtgaccgcccgcggaggtcatgaccctcatatctgggagaccacggtcaagctggcc
ttggctggccacccgccttctgttcctgtgagtcagattggagtggaggatatgattgca
agggcctgggactctaatcccagggttatcaagtttccacggaaacatcaaagaagctct
tctgccaatggtctgagacgacagaagcgagactgggtcatcccaccaatcaatgtgccc
gaaaactctagaggacccttcccacaaatgcttgtcagaatccgctcagaccaggacctg
gagaaagggatccgctacagcatcactggagcaggggcggaccagcctcccattgacgtg
tacaacattgaccctgtgcacggcaagatgtttgttaccagacccctggacagagaggag
agggcctcctaccatctgcgggcccatgctgtggacatgaacgggaacaaggtggaaagc
cccatagacctgtacatctacgtcatcgacatgaatgacaaccggccagagttccagaac
caggtgtacaacggctctgtggctgaaggctctaaaccaggcacgttagtgatgcaggtg
accgccaacgactcagatgacgacaccacagccaatgggatggtgcggtaccggatccta
tcccagaccccccacatgccaatccccaatatgttcaccatcaacagcgagacgggagac
atcttcacggttgccgccggcttggacagggagaaagtgtcccagtacaccatcatcgtc
caggccacggacatggaggggaacctgaactttggcctgtccaacacggccaccgccctc
atctctgtgaccgacatcaacgacaaccctcccgagctgaccgccaggacgttttcgggg
gaggtcccagagaacagggtgaatgtggtggtggccaatctgacagtgattgacagggat
cagcctcacagccccaactgggctgcccagtaccgcatcgccagtggagacccccagggt
cacttcctcatccgcaccaaccctgtcaacaatgacggcatggtcactgtggtcaagcca
gtggactatgagcagaacagggccttcatgctgacggtgatagtctctaacaaggcccct
ctggccagtgggatccagtcttctctccagtcttcagcgggggtcaccatctccgtacag
gatgtcaacgaaccccctgtcttcccttccaaccccaagtccatccgtttcgaggagggt
gtccctgcaggcaccacactcaccgtgtttgctgcccaagaccctgacctcttcatccat
cagactgtccggtactcaaagctgtctgacccagctaactggctgaggatcaacaggacc
aacggtcagatcaccaccatggccgtgctggacagggagtccatgtatgtcaggaacaac
atctatgaggccaccttcctggctgccgacaatggtaagtctggctctccccctgccagt
gggacaggcactctacagatacatctgatagatgtgaatgacaatgctccagtgctgttg
cccaaggaggcccaggtgtgtgaacgggccagcccccgctccagggtcaacatcacagcc
tccgacgccgacgctgaccctcacgtggggccttttgtgttcgagctgccctcctacccc
cctagcgtccgacgcaactggaccgcctcccgcataagcggtgactatgcccagctgaga
ctgaggattccctacctggatgcaggggtgtatgatgttcccatcatagtgtcggactct
gggaacccgcccctctctaacaggtctatgataaaggtcaaggtgtgtccgtgtgacgac
aacggagactgtactaccaccggagctgtagctgccgctggactggggaccggagcgatc
atagccatactcatctgtatcatcatactgcttacaatggtactggtgtttgtgatgtgg
atgaagcggagggagaaggagcgtcaggccaagcccctgttgattgacccagaggacgac
gtcagagacaacatcctgaaatacgatgaggagggaggaggagaggaggaccaggactat
gacctaagccaattgcagcagcccgaggctctggatcacatcatctgtaaaccaacgggg
gtgcgcagggtggacgagaggcctgtcatcgctgagtcccagtatcccatcagacctagc
ctgcctcatcccggagatattggagacttcatcaacgacggtctgagggcagcagacaac
gaccccacagccccgccctatgactccctgctggtgtttgactatgagggcagcggctcc
acggccggctctgtcagctccctcaactcctcaagctcaggggaccaggactacgactac
ctcaacgactggggcccccgcttcaagaagctggctgacctctacggcggaggagacgac
gactga

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