Oncorhynchus mykiss (rainbow trout): 110527967
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Entry
110527967 CDS
T07259
Symbol
magi1b
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1b isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110527967 (magi1b)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
110527967
NCBI-ProteinID:
XP_036839343
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All DBs
Position
7:50597192..50798627
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AA seq
1611 aa
AA seq
DB search
MSKVIQKKNHWTTKVNECAVLKDARGDLNVQLLGGAENGEFAYIGQVNDGIVVYKNGKLT
EGALILEVENLSISGLPLYDVQTVIKNCSGPIRLRTVRQGNKLNKDLKHYLSQRFQKSSP
DHELQQTIRDNLYRHAVPCTTRPPRHGEVPGVDYNFLPVEDFLALEQRGTLLEIGTYEGN
YYGTPKPPSQPPSGKVITSDALQDSLPGSQHSTPRRTKSYNEMQNAGIVPVDLEEDEELP
EMNSSLTGDSSEPDEHPSVRPYALRENAPSYGVINASSSTTDGSQQTHTHLSRPPTEEDP
LGPLADNWEMAYTENGEVYFIDHNTKTTSWIDPRCLNKPPKPLEECEDDEGVHTEEMDSE
LELPTGWEKIEDPVYGLYYVDHINRKTQYENPIQEAKRRKQLEQQQPPEGERYIREWIED
ATMAGAPLASYTANHQETYRDTQARPPLPPLIGPKRGKPFFTRNPAELKGTFINTKLRKS
HRGFGFTVVGGDEPDEFLQIKSLVLDGPAAIDGKMETGDVIVSVNDTCVLGYTHAQVVKV
FQSIQIGSIVNLELCRGYPLPFDPDDPNTSLVTSVAIVDKEPIIINGQESYDSPSSHGSQ
TGGPVNGMRESGPHSPSSAEVASNGSHSYPSDSVTLASSIATQPELITVHMEKGDKGFGF
TIADSPAGGGQRVKQIVDYPRCRGLKEGDIIVEVNKRNVQSMSHNQVVDLLSKCPKGSEV
TMLVQRGGGVAPAKKSPKLQLARKDSQNSPVHSVSSHRSTHTDSPVHPSLATPFSESAAP
PPPSQPLPGLPPQDAQADGTIQRKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGYG
FRILGGNEPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVVGKSHQLVVQLMQQAA
KQGHVNLTVRRKTGYGGSKGEGEVPPSPASSHHSSTQAPSLTEEKRTPQGSQNSLNTVSS
GSGSTSGIGSGGGGGSGSTVVNTALQPYDVEIRRGENEGFGFVIVSSVSRPESGTTFAGN
ACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLR
IIPGDESSNASLLTNAEKIATITTTHTAQQQATPEPRNNTKPKQESSFEFKSPQAPPPPA
PTTQPPAQDAGFYSVDLERENKGFGFSLRGGHEYNMDLYVLRLAEDGAAVRNGKMKVGDE
ILEINGESTKGMKHARAIELIKNGGRRARLVLKRGDGSVPEYDPSIDGAGPAAGVQNASE
VSTLPYNNAPSDTNAPVPHKPSRSKNKKGHHHSKHRSPEKKSQGGASGETRASKQSKKKV
DRSQRSGGDTHGTHHRGHHSPNKGRSRARSAENTLDSRHSQEHHNTHRSPYRSTHRNRSP
YGHRSPYRSPHRSHHHSPTRYRRTQSSDPYRQPSLDRQRHREPERPNGEKAPVLRKPPGP
VPSPFLDESLLQEPPALDQLNREVTRLRESREEHLFGEDSLLLTASNLERDYRGDSLLSA
AARGQRGEILPRVHTPESDSAYKRYSSLLRGRSPERVEREPRSPDPHHRARSLGQDISPV
RSFREPEEEEEAAPRLKEYYSTLKSNASRASKALPKPKRKAHKDGTKDLSI
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagtgatccaaaagaagaatcactggaccactaaagttaacgagtgcgcggtc
ctcaaagacgctcgcggtgacttaaatgtgcaattgctcggtggtgcggagaacggagag
ttcgcctacatcggacaagttaacgatggtatcgtggtttacaaaaatggaaaattaaca
gagggggcgttgatattggaagtagagaacctctcgatctctgggttgcccctgtatgat
gtacagacagtgataaagaattgcagtggtcccatcagattgagaacggtcagacaagga
aacaagctgaataaggacctgaagcactatctgagccagcgattccagaagtcctctccg
gaccacgagctgcagcagaccatccgagacaacctctaccgccacgccgtgccttgtaca
acccgtcccccgcgtcacggagaggtccctggggtagattacaacttcctgccggtggag
gacttcctggcgctggagcagaggggaacccttctggaaataggaacatatgaaggtaac
tattatggaacacccaagccaccgagccagccccctagtgggaaagtgattactagtgat
gctttgcaagacagcctcccgggctcccagcactccactccccgacgcaccaagtcctac
aatgagatgcaaaatgctggaatagtgcctgtagacctggaggaggacgaggaactcccg
gagatgaacagtagtttaacaggagactcaagtgaacccgacgagcacccttccgtgcgc
ccctacgccctacgtgagaacgccccgtcctatggtgtgatcaacgcgtcgtcatccacc
acggacggctctcagcagacacacacacacctcagccgtcctcccacagaggaggacccc
ctgggacctctagctgataactgggagatggcctacaccgagaacggagaggtctacttt
atagaccacaacacaaagaccacatcctggatcgacccccgctgcctcaacaaaccccct
aaacccctggaagaatgtgaagacgacgaaggggtacacacagaagagatggacagtgag
ctagagctgccaacaggctgggagaaaatagaggacccagtctacgggctttactatgtg
gatcacatcaacaggaagacccagtatgagaaccctatacaggaagctaagcggcggaag
cagctcgagcaacagcagccaccagaaggtgagcgctacatccgagaatggatagaggat
gctaccatggctggtgcccccctggccagctataccgccaaccaccaggagacctacagg
gacacccaagccagacccccactgccgcccctcatcgggccaaaacgagggaagcccttc
ttcacgcggaacccggcggagctgaagggaacctttatcaacaccaaactaaggaagagc
caccgagggttcggcttcaccgtcgtcgggggcgacgagcctgatgagttcctacagatc
aagagtctggttctggacggacctgctgccatcgacggcaagatggagacaggtgacgtg
atcgtgagtgtcaatgacacgtgcgtgctgggctacacccacgctcaggtggtgaaggtc
ttccagtccatccagatcggctccatcgtcaacctggagctgtgccgcggctaccccctg
ccctttgatccagacgaccccaacactagcctggtgacctccgtggccattgtggacaag
gagcctatcatcatcaacggccaggagagctacgactctccgtccagccacggcagccag
accggaggccccgttaatgggatgagagagtcaggaccccacagcccctcctctgccgag
gtggcgtccaacggctcgcacagttaccccagcgactctgtgacgctggcgtcgtccata
gcgacgcagccggagctgatcacagtgcacatggagaagggagacaaaggctttgggttc
accatcgcagacagccctgcagggggaggacagagggtcaaacagatcgtagactacccc
cgctgcaggggcctgaaggagggggacattattgtggaggtgaacaagaggaacgtccag
agcatgagccacaaccaggtggtggacctgctcagcaagtgccccaaaggaagtgaggtc
accatgctggtgcagagaggtggaggggtggctcctgcaaagaagagcccaaagctgcag
ttagcgaggaaggacagtcagaacagtcctgtgcacagtgtgtccagccaccggagtacc
cacactgactcccctgtgcacccatccctggccaccccattcagcgagagcgccgccccc
ccacccccctcccagcccctgcccggcctgcctccccaggacgctcaggcagacggaacc
atccagaggaaaccggaccccttcaagatctgggcccagtccaggagcatgtatgaaagt
aggctgcctgacttccaggagcaggacatcttcctgtggagaaaggacacgggctacggg
ttccggatcctgggagggaacgagccaggagagccgatctacatagggcacatagtgaag
tacggggcggcggatgaggacgggcgcctgcgttcgggggatgagctcatctgtgtggat
ggcacggcggtggtggggaagtctcaccagctggtggtacagctgatgcagcaggccgcc
aagcagggccacgtcaacctcaccgtgcgacggaagaccggctacggcgggtctaaaggg
gagggcgaggtgcccccgtccccagcctcgtcccaccacagcagcacacaggctccctcc
ctgacagaggagaagcggaccccccagggcagccagaactccctcaacacagtcagctcc
ggcagtggctccaccagtggcatcggcagtgggggtggtgggggctcgggtagcaccgtg
gtcaacactgccctgcagccctacgatgtggagatccgccgcggggagaacgagggcttc
ggatttgtgattgtctcttctgtgtcccgacccgagtctggcaccacctttgctggaaat
gcatgtgtggccatgccccacaaaataggtcgtattattgaggggagccctgcggaccgc
tgtgggaagctgaaggtgggagaccgtatcctggccgtcaacggctgctccatcaccaac
aagtcccactcggacatcgtcaacctgatcaaggaggccgggaacacggtcacgctaagg
atcattcccggagacgagtcctctaatgcatcactgctgaccaacgctgagaagatcgcc
actataacaactactcacacagcccaacaacaggctacacctgagcccagaaacaacacc
aaaccaaaacaggagtcctcttttgagttcaaatccccccaggcccctcctccccctgcc
ccaacaacacaacctccagcccaggatgctggcttctactcggtggacctggagagagag
aacaaaggttttgggttcagcctgagaggaggtcatgagtacaacatggacctgtatgtg
ctgagattagccgaggatggagcagctgtacgcaatggcaagatgaaggtgggagatgag
atcttggagataaacggtgagagcaccaagggcatgaagcacgcccgcgccatcgaactg
attaaaaacggcggtcgccgcgcccgcctagtcctcaaacggggcgacggctcggtgcct
gaatatgaccccagcatcgacggtgccggcccagccgcaggggtacaaaacgcttcggaa
gtgagcaccctgccctacaacaacgcaccatcggacacgaacgcaccagtccctcacaaa
ccatcacggagcaagaacaagaagggccaccaccattccaaacaccgatccccggaaaag
aagagccagggaggggcgtctggggagacaagggcctccaagcagtccaagaaaaaagtt
gacaggagccagaggtctggcggggatacccacggcactcaccaccgaggacaccactcc
ccgaataagggccgtagccgggcccgcagtgcagagaacaccctagacagtagacacagc
caagagcaccacaacacccaccgctctccctacaggtccactcaccgcaatcggtccccc
tatggccaccggtccccctaccgctccccccaccgctcacaccaccactcccccacccgc
taccgccgtacccaatcctcagacccctaccggcagccctccctagacagacagcgacac
agagagccagagaggcccaacggggagaaggcaccagtgctgaggaagcctcctggccct
gtgcccagccccttcctggatgagagcctcctacaggagcccccagccctggaccagctc
aacagggaggtcacgcgactgagggagtccagagaggagcacctgtttggggaggacagc
cttctgctgacggcctccaacctggagcgtgactacagaggagacagcctgttatctgct
gctgcccgtggccagagaggggagatccttcccagggtccacacccctgagtcagacagc
gcctacaagaggtacagctcactgctaaggggccgctcgcctgagagagtggagagagag
ccgcgctccccagacccccaccatagagcccgtagcctgggccaagacatttcacctgtc
agaagcttcagagaaccggaggaggaggaagaggcagcacccagactgaaagagtattac
agcacacttaagtctaatgccagccgtgcttccaaagctctcccgaagcccaagcggaag
gcccataaagatggcaccaaagacctgagcatctga
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integrated database retrieval system
